RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 RNPS1Q15287 305 aaKnown RBP9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 COX19Q49B96 90 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 COL25A1Q9BXS0 654 aaPredicted RBP9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 FOXQ1Q9C009 403 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 UQCR10Q9UDW1 63 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 OR5B21A6NL26 309 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 PLA2G10O15496 165 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 ADAP1O75689 374 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 MBPP02686 304 aaPredicted RBP9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 FGF2P09038 288 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 TNFRSF1AP19438 455 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 P2RY1P47900 373 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 UBE2V2Q15819 145 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 PRSS41Q7RTY9 318 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 GVQW1Q8N7I0 195 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 OR4B1Q8NGF8 309 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 MOGAT1Q96PD6 335 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 NAT8Q9UHE5 227 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 ITGB4P16144 1822 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 LRRC3CA6NJW4 275 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 CDK2AP1O14519 115 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 GNG4P50150 75 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 PDCD1Q15116 288 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 ISXQ2M1V0 245 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 FDX2Q6P4F2 183 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 OR10AD1Q8NGE0 317 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 OR5D13Q8NGL4 314 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 OR5M9Q8NGP3 310 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 TMPRSS13Q9BYE2 586 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 AAMDCQ9H7C9 122 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 FUT9Q9Y231 359 aa9.09□□□□□ -0.95
LIMCH1-203ENST00000396595 CISD3P0C7P0 127 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 BMI1P35226 326 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 NPBWR2P48146 333 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 CCL7P80098 99 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 LHX8Q68G74 356 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 ZNF774Q6NX45 483 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 OR11G2Q8NGC1 345 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 UBALD1Q8TB05 177 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 RPS4Y2Q8TD47 263 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 COX14Q96I36 57 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 ANGPTL4Q9BY76 406 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 FFAR1O14842 300 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 FCGR3BO75015 233 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 CYB5R3P00387 301 aaPredicted RBP9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 ADIPOQQ15848 244 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 TEX30Q5JUR7 227 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 LILRA6Q6PI73 481 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 NUFIP2Q7Z417 695 aaKnown RBP9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 NTMQ9P121 344 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 ZFP30Q9Y2G7 519 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 AMDHD2Q9Y303 409 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 CCL27Q9Y4X3 112 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 ITGBL1O95965 494 aaPredicted RBP9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 S100A4P26447 101 aaKnown RBP9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 KIR2DS2P43631 304 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 PAFAH1B2P68402 229 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 BSXQ3C1V8 233 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 PABPC1L2AQ5JQF8 200 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 TMEM215Q68D42 235 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 SLC35E4Q6ICL7 350 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 SLC36A1Q7Z2H8 476 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 OR10G4Q8NGN3 311 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 OR10G9Q8NGN4 311 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 OR10G7Q8NGN6 311 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 OR1L6Q8NGR2 347 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 PTP4A1Q93096 173 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 MOB3AQ96BX8 217 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 ANXA10Q9UJ72 324 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 TRGV5A0A0B4J1U4 118 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 A0A0B4J293 547 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 LOC107984156A0A0G2JMH3 177 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 OR4C46A6NHA9 309 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 NDUFB3O43676 98 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 HLA-GP17693 338 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 TIAL1Q01085 375 aaKnown RBP eCLIP9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 RELQ04864 619 aaPredicted RBP9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 CLEC18BQ6UXF7 455 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 ARL17AQ8IVW1 177 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 GPBAR1Q8TDU6 330 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 MS4A7Q9GZW8 240 aaPredicted RBP9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 SLC25A22Q9H936 323 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 SERGEFQ9UGK8 458 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 CEBPDP49716 269 aaPredicted RBP9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 TRA2AQ13595 282 aaKnown RBP eCLIP9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 LRRC10Q5BKY1 277 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 SLC25A42Q86VD7 318 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 OR6X1Q8NH79 312 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 ANAPC13Q9BS18 74 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 ZMIZ1Q9ULJ6 1067 aa9.08□□□□□ -0.96
LIMCH1-203ENST00000396595 TCRBV16S1A1N1A0A5B0 115 aa9.07□□□□□ -0.96
LIMCH1-203ENST00000396595 KLF9Q13886 244 aaPredicted RBP9.07□□□□□ -0.96
LIMCH1-203ENST00000396595 Q56UQ5 140 aa9.07□□□□□ -0.96
LIMCH1-203ENST00000396595 CBLN3Q6UW01 205 aa9.07□□□□□ -0.96
LIMCH1-203ENST00000396595 OR11H7Q8NGC8 314 aa9.07□□□□□ -0.96
LIMCH1-203ENST00000396595 MANBALQ9NQG1 85 aa9.07□□□□□ -0.96
LIMCH1-203ENST00000396595 MFSD2BA6NFX1 497 aa9.07□□□□□ -0.96
LIMCH1-203ENST00000396595 TNFSF15O95150 251 aa9.07□□□□□ -0.96
LIMCH1-203ENST00000396595 CT62P0C5K7 136 aa9.07□□□□□ -0.96
LIMCH1-203ENST00000396595 RNF224P0DH78 156 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms