RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PDGFAP04085 211 aa12.58□□□□□ -0.4
TCOF1-202ENST00000377797 CTSDP07339 412 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-202ENST00000377797 PLAURQ03405 335 aa12.58□□□□□ -0.4
TCOF1-202ENST00000377797 TMED3Q9Y3Q3 217 aa12.58□□□□□ -0.4
TCOF1-202ENST00000377797 KRBOX1C9JBD0 128 aa12.58□□□□□ -0.4
TCOF1-202ENST00000377797 NUBP1P53384 320 aa12.58□□□□□ -0.4
TCOF1-202ENST00000377797 FAM3AP98173 230 aa12.58□□□□□ -0.4
TCOF1-202ENST00000377797 RAB32Q13637 225 aa12.58□□□□□ -0.4
TCOF1-202ENST00000377797 MOGAT3Q86VF5 341 aa12.58□□□□□ -0.4
TCOF1-202ENST00000377797 SUMF2Q8NBJ7 301 aa12.58□□□□□ -0.4
TCOF1-202ENST00000377797 RBPMSQ93062 196 aaKnown RBP12.58□□□□□ -0.4
TCOF1-202ENST00000377797 PRDM14Q9GZV8 571 aa12.58□□□□□ -0.4
TCOF1-202ENST00000377797 GCM1Q9NP62 436 aa12.58□□□□□ -0.4
TCOF1-202ENST00000377797 IGHV3-43A0A0B4J1X8 118 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 PINLYPA6NC86 204 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 NDUFB3O43676 98 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 IGHV3-43DP0DP04 118 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 TEX261Q6UWH6 196 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 SLC25A42Q86VD7 318 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 ZFP62Q8NB50 900 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-202ENST00000377797 ZNF485Q8NCK3 441 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 TMEM45BQ96B21 275 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 ZNF552Q9H707 407 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-202ENST00000377797 TREM2Q9NZC2 230 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 ELF5Q9UKW6 265 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-202ENST00000377797 MRPS18CQ9Y3D5 142 aaKnown RBP12.57□□□□□ -0.4
TCOF1-202ENST00000377797 U3KQ87 197 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 TECTAO75443 2155 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 LRRC3CA6NJW4 275 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 DHRS7CA6NNS2 312 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 TRDCB7Z8K6 153 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 MPC2O95563 127 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 HAND1O96004 215 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 FOSL1P15407 271 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 TLE4Q04727 773 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 KCNMB1Q16558 191 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 PHYHD1Q5SRE7 291 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 ZBTB37Q5TC79 503 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 GGNBP1Q5YKI7 109 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 SLC39A9Q9NUM3 307 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 PSG11Q9UQ72 335 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 DIDO1Q9BTC0 2240 aaKnown RBP12.57□□□□□ -0.4
TCOF1-202ENST00000377797 C3orf85A0A1B0GTC6 90 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 PRSS44E7EML9 344 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 M0R1X1 148 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 SCGB2A1O75556 95 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 PPYP01298 95 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 CD3EP07766 207 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 MARC2Q969Z3 335 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 MPDZO75970 2070 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 HOXD4P09016 255 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-202ENST00000377797 COX5BP10606 129 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 HES1Q14469 280 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 LAMP3Q9UQV4 416 aa12.57□□□□□ -0.4
TCOF1-202ENST00000377797 ABCD4O14678 606 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 ALX3O95076 343 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 PTGDSP41222 190 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 KCNJ3P48549 501 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 LRRC10Q5BKY1 277 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 TMEM123Q8N131 208 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 RPS10P5Q9NQ39 176 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 BCL2L11O43521 198 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 IGHV3-13P01766 116 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 IGHV3-7P01780 117 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 GHITMQ9H3K2 345 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 OPN4Q9UHM6 478 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 PLXND1Q9Y4D7 1925 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 ADAM10O14672 748 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 CST7O76096 145 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 HBE1P02100 147 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 KITLGP21583 273 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 LHX2P50458 406 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 LYPD8Q6UX82 237 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 LIPGQ9Y5X9 500 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 PHF3Q92576 2039 aaKnown RBP12.56□□□□□ -0.4
TCOF1-202ENST00000377797 CEP350Q5VT06 3117 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 TMEM255AQ5JRV8 349 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 KIAA1671Q9BY89 1806 aa12.56□□□□□ -0.4
TCOF1-202ENST00000377797 RCL1Q9Y2P8 373 aaKnown RBP12.56□□□□□ -0.4
TCOF1-202ENST00000377797 C17orf112F2Z3M2 114 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 CBR1P16152 277 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 Q0VFX4 171 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 ADAD2Q8NCV1 583 aaKnown RBP12.55□□□□□ -0.4
TCOF1-202ENST00000377797 PLXNB3Q9ULL4 1909 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 HOXB1P14653 301 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-202ENST00000377797 CLDN18P56856 261 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 FOXO1Q12778 655 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 SFT2D1Q8WV19 159 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 OR5B12Q96R08 314 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 MYO7BQ6PIF6 2116 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 RPL36A-HNRNPH2H7BZ11 118 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 CCL21O00585 134 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 OR8U8P0C7N1 319 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 NKX6-1P78426 367 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-202ENST00000377797 RTL8BQ17RB0 113 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 ZNF674Q2M3X9 581 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 HFEQ30201 348 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 GP6Q9HCN6 339 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 MYOZ1Q9NP98 299 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-202ENST00000377797 ZNF318Q5VUA4 2279 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms