RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 BPESC1Q9GZL8 116 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 POLR2J2Q9GZM3 115 aaKnown RBP3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 POLR2J3Q9H1A7 115 aaKnown RBP3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 C20orf85Q9H1P6 137 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 DDX18Q9NVP1 670 aaKnown RBP3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 FAIMQ9NVQ4 179 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 AIG1Q9NVV5 245 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 TMEM216Q9P0N5 145 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 POLR3HQ9Y535 204 aaPredicted RBP3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 KIF25-AS1Q9Y6Z4 181 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 PLCE1Q9P212 2302 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 ATP6V1G2-DDX39BF2Z307 99 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 M0R1B8 84 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 TCF21O43680 179 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 UPK3AO75631 287 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 MMP23AO75900 390 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 KRT6AP02538 564 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 IFI6P09912 130 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 PRPS2P11908 318 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 ME2P23368 584 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 ELK4P28324 431 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 RBMXP38159 391 aaKnown RBP3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 EIF1P41567 113 aaKnown RBP3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 PSMD4P55036 377 aaKnown RBP3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 NDPQ00604 133 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 UAP1Q16222 522 aaPredicted RBP3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 DGUOKQ16854 277 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 SPIN4Q56A73 249 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 C1orf100Q5SVJ3 147 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 FBXW9Q5XUX1 488 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 NOXRED1Q6NXP6 359 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 C12orf54Q6X4T0 127 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZCCHC24Q8N2G6 241 aaKnown RBP3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 NKAPP1Q8N9T2 125 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 SPATA4Q8NEY3 305 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 OR52E4Q8NGH9 312 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 CDC26Q8NHZ8 85 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZFP90Q8TF47 636 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 DCAKDQ8WVC6 231 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 RASD2Q96D21 266 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 MUCL1Q96DR8 90 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 ARL5BQ96KC2 179 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 NARFLQ9H6Q4 476 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 UBQLN4Q9NRR5 601 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 GIN1Q9NXP7 522 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 IKZF2Q9UKS7 526 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 SAR1BQ9Y6B6 198 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 FREM1Q5H8C1 2179 aa3.92□□□□□ -1.78
RNU4-39P-201ENST00000362455 UQCRHLA0A096LP55 91 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 FAM231BA6NCW3 169 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 TRIM49D1C9J1S8 452 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 LYNX1G3V0Z9 82 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 SMIM24O75264 130 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 OR7A10O76100 309 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 SUPT7LO94864 414 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 TACSTD2P09758 323 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 LYNX1P0DP58 116 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 GABRR1P24046 479 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 COX7A1P24310 79 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 CRYBB2P43320 205 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 P2RX1P51575 399 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 GNG11P61952 73 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 H3F3AP84243 136 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 C2orf54Q08AI8 447 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 ARFRP1Q13795 201 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 GNMTQ14749 295 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 QPRTQ15274 297 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNHIT3Q15649 155 aaPredicted RBP3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 ATP6AP1LQ52LC2 224 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 TSPO2Q5TGU0 170 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 C9orf135Q5VTT2 229 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 AP1ARQ63HQ0 302 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 TMPPEQ6ZT21 453 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZIC4Q8N9L1 334 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 CDRT4Q8N9R6 151 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 OR5W2Q8NH69 310 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 LINC01006Q8NI28 216 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 KCNG3Q8TAE7 436 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 DCUN1D4Q92564 292 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 CDS1Q92903 461 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 RPUSD4Q96CM3 377 aaKnown RBP3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 ITCHQ96J02 903 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 FCRL1Q96LA6 429 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 DOK1Q99704 481 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 NAPGQ99747 312 aaPredicted RBP3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 GPR61Q9BZJ8 451 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 SHCBP1LQ9BZQ2 653 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 OR11A1Q9GZK7 315 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 SLC2A8Q9NY64 477 aa3.91□□□□□ -1.78
RNU4-39P-201ENST00000362455 MALRD1Q5VYJ5 2156 aa3.9□□□□□ -1.78
RNU4-39P-201ENST00000362455 KMT2CQ8NEZ4 4911 aaKnown RBP3.9□□□□□ -1.78
RNU4-39P-201ENST00000362455 HEATR5AQ86XA9 2040 aa3.9□□□□□ -1.78
RNU4-39P-201ENST00000362455 IGHV1-18A0A0C4DH31 117 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 CIB4A0PJX0 185 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 NDUFS8O00217 210 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 ERLIN1O75477 346 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 TMEM50AO95807 157 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 CST1P01037 141 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 C1QCP02747 245 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 HMGN2P05204 90 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms