RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 HERC2O95714 4834 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 IGKV1-27A0A075B6S5 117 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 DAPL1A0PJW8 107 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 SNTNA6NMZ2 147 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 CYB5AP00167 134 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 HTR1DP28221 377 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 RBP2P50120 134 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 ATP1B3P54709 279 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 EDDM3BP56851 147 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 SNRPGP62308 76 aaKnown RBP12.51□□□□□ -0.41
DDX55-202ENST00000354291 ZFP1Q6P2D0 407 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 SLC25A26Q70HW3 274 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 GDPD3Q7L5L3 318 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 C10orf67Q8IYJ2 551 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 ENTHD1Q8IYW4 607 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 RDH10Q8IZV5 341 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 ZNF676Q8N7Q3 588 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 SLAMF9Q96A28 289 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 SNX22Q96L94 193 aa12.51□□□□□ -0.41
DDX55-202ENST00000354291 MYCBPQ99417 103 aaPredicted RBP12.51□□□□□ -0.41
DDX55-202ENST00000354291 IGHV2-26A0A0B4J1V2 119 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 F8VVB4 439 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 F8VWA3 439 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 ENTPD6O75354 484 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 ZNF737O75373 536 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 INMTO95050 263 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 RBP4P02753 201 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 ISG15P05161 165 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 PRKACBP22694 351 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 KIR3DL2P43630 455 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 ALDH3A2P51648 485 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 FDX2Q6P4F2 183 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 UTS2BQ765I0 119 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 OR8H2Q8N162 312 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 OR2G2Q8NGZ5 317 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 RNFT2Q96EX2 444 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 MRPL48Q96GC5 212 aaKnown RBP12.5□□□□□ -0.41
DDX55-202ENST00000354291 LINC00527Q9UJ94 153 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 SORL1Q92673 2214 aa12.5□□□□□ -0.41
DDX55-202ENST00000354291 J3QRE1 110 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 EI24O14681 340 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 SLC16A6O15403 523 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 JTBO76095 146 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 ZNF20P17024 532 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 CCR9P51686 369 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 MTCP1P56278 107 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 MEF2CQ06413 473 aaPredicted RBP12.49□□□□□ -0.41
DDX55-202ENST00000354291 DEFB136Q30KP8 78 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 ZNF260Q3ZCT1 412 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 ACBD7Q8N6N7 88 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 CHPT1Q8WUD6 406 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 EMG1Q92979 244 aaKnown RBP12.49□□□□□ -0.41
DDX55-202ENST00000354291 RNF166Q96A37 237 aaPredicted RBP12.49□□□□□ -0.41
DDX55-202ENST00000354291 ADAT3Q96EY9 351 aaPredicted RBP12.49□□□□□ -0.41
DDX55-202ENST00000354291 ZNF714Q96N38 554 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 CLEC7AQ9BXN2 247 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 FRRS1LQ9P0K9 344 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 DPM3Q9P2X0 92 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 GLS2Q9UI32 602 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 SESN1Q9Y6P5 492 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 PCLOQ9Y6V0 5065 aa12.49□□□□□ -0.41
DDX55-202ENST00000354291 TRBV2A0A0J9YWF9 115 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 hADV38S2A0JD32 116 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 M0QZK8 103 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 HAND1O96004 215 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 HTR1AP08908 422 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 FRMD6-AS1P0C7T7 363 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 OCM2P0CE71 109 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 OCMP0CE72 109 aaPredicted RBP12.48□□□□□ -0.41
DDX55-202ENST00000354291 ATF1P18846 271 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 PEX2P28328 305 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 ARHGDIBP52566 201 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 KPNB1Q14974 876 aaKnown RBP12.48□□□□□ -0.41
DDX55-202ENST00000354291 ZIK1Q3SY52 487 aaPredicted RBP12.48□□□□□ -0.41
DDX55-202ENST00000354291 LCNL1Q6ZST4 164 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 LHFPL2Q6ZUX7 228 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 FAM58AQ8N1B3 248 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 OR4P4Q8NGL7 312 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 SPSB1Q96BD6 273 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 FGGYQ96C11 551 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 ISOC1Q96CN7 298 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 TMEM133Q9H2Q1 129 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 HHLA2Q9UM44 414 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 EXOGQ9Y2C4 368 aaKnown RBP12.48□□□□□ -0.41
DDX55-202ENST00000354291 RYR1P21817 5038 aa12.48□□□□□ -0.41
DDX55-202ENST00000354291 IGKV1-9A0A0C4DH69 117 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 SERPINE3A8MV23 424 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 H3BNX3 289 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 J3QLW9 94 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 RPSAP08865 295 aaKnown RBP12.47□□□□□ -0.41
DDX55-202ENST00000354291 ZNF19P17023 458 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 GABRR1P24046 479 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 POU3F4P49335 361 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 SLC35B1P78383 322 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 ZNF146Q15072 292 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 SPIN3Q5JUX0 258 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 ZBTB49Q6ZSB9 765 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 MBOAT4Q96T53 435 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 DCLRE1BQ9H816 532 aa12.47□□□□□ -0.41
DDX55-202ENST00000354291 RBFOX1Q9NWB1 397 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms