RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PAN3Q58A45 887 aaKnown RBP15.73■□□□□ 0.11
SYNE4-202ENST00000340477 AWAT2Q6E213 333 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 ASCL4Q6XD76 172 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 CEACAM19Q7Z692 300 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 LINC00596Q86U02 117 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 ZDHHC22Q8N966 263 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 OR51T1Q8NGJ9 327 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 SPATA3Q8NHX4 192 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 PHYHIPQ92561 330 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 MUL1Q969V5 352 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 MGLLQ99685 303 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 NKX3-1Q99801 234 aaPredicted RBP15.73■□□□□ 0.11
SYNE4-202ENST00000340477 YTHDF1Q9BYJ9 559 aaKnown RBP15.73■□□□□ 0.11
SYNE4-202ENST00000340477 ESM1Q9NQ30 184 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 FBN1P35555 2871 aaKnown RBP15.73■□□□□ 0.11
SYNE4-202ENST00000340477 TRGV10A0A0A0MS01 117 aa15.72■□□□□ 0.11
SYNE4-202ENST00000340477 MDFIC2A0A1B0GVS7 189 aa15.72■□□□□ 0.11
SYNE4-202ENST00000340477 MAGEA13PA6NCF6 341 aa15.72■□□□□ 0.11
SYNE4-202ENST00000340477 SLC33A1O00400 549 aaPredicted RBP15.72■□□□□ 0.11
SYNE4-202ENST00000340477 CSN2P05814 226 aa15.72■□□□□ 0.11
SYNE4-202ENST00000340477 GTF2F2P13984 249 aa15.72■□□□□ 0.11
SYNE4-202ENST00000340477 TUSC1Q2TAM9 212 aa15.72■□□□□ 0.11
SYNE4-202ENST00000340477 SLC22A6Q4U2R8 563 aa15.72■□□□□ 0.11
SYNE4-202ENST00000340477 GLT8D1Q68CQ7 371 aa15.72■□□□□ 0.11
SYNE4-202ENST00000340477 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.72■□□□□ 0.11
SYNE4-202ENST00000340477 FOXRED1Q96CU9 486 aaPredicted RBP15.72■□□□□ 0.11
SYNE4-202ENST00000340477 UQCC2Q9BRT2 126 aa15.72■□□□□ 0.11
SYNE4-202ENST00000340477 GAL3ST2Q9H3Q3 398 aa15.72■□□□□ 0.11
SYNE4-202ENST00000340477 ST3GAL6Q9Y274 331 aa15.72■□□□□ 0.11
SYNE4-202ENST00000340477 A0A0G2JK05 382 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 A0A0U1RQK1 487 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 MEIOCA2RUB1 952 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 CLDN34H7C241 214 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 PIN1P1O15428 100 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 ARL6IP5O75915 188 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 CPEP16870 476 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 RBM11P57052 281 aaKnown RBP15.71■□□□□ 0.11
SYNE4-202ENST00000340477 PRB3Q04118 309 aaPredicted RBP15.71■□□□□ 0.11
SYNE4-202ENST00000340477 ATXN7L3Q14CW9 347 aaPredicted RBP15.71■□□□□ 0.11
SYNE4-202ENST00000340477 PIGYQ3MUY2 71 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 NHLRC3Q5JS37 347 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 KRBOX4Q5JUW0 171 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 Q6P435 159 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 GLIPR1L1Q6UWM5 242 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 UNQ9370/PRO34162Q6UXP9 181 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 TPRX1Q8N7U7 411 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 Q8NFD4 153 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 OR13D1Q8NGV5 346 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 SSMEM1Q8WWF3 244 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 TNFRSF14Q92956 283 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 TMEM203Q969S6 136 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 DUX5Q96PT3 197 aa15.71■□□□□ 0.11
SYNE4-202ENST00000340477 UBE2J1Q9Y385 318 aaPredicted RBP15.71■□□□□ 0.11
SYNE4-202ENST00000340477 SOX21Q9Y651 276 aaPredicted RBP15.71■□□□□ 0.11
SYNE4-202ENST00000340477 A0A1W2PRD5 423 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 A0A1W2PRF3 423 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 A0A1W2PRM7 423 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 BTBD17A6NE02 478 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 C17orf98A8MV24 154 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 HSPB6O14558 160 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 HOXA3O43365 443 aaPredicted RBP15.7■□□□□ 0.1
SYNE4-202ENST00000340477 OR7C1O76099 320 aaPredicted RBP15.7■□□□□ 0.1
SYNE4-202ENST00000340477 COX7A1P24310 79 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 GABRA5P31644 462 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 SAA4P35542 130 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 KCNJ3P48549 501 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 DLX1P56177 255 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 LGALS4P56470 323 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 MPV17LQ2QL34 196 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 MIDNQ504T8 468 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 Q6YL49 198 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 ZNF782Q6ZMW2 699 aaPredicted RBP15.7■□□□□ 0.1
SYNE4-202ENST00000340477 TMEM86BQ8N661 226 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 MRPS24Q96EL2 167 aaKnown RBP15.7■□□□□ 0.1
SYNE4-202ENST00000340477 BARHL1Q9BZE3 327 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 PRDM13Q9H4Q3 707 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 ACOT13Q9NPJ3 140 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 ING3Q9NXR8 418 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 POMT1Q9Y6A1 747 aa15.7■□□□□ 0.1
SYNE4-202ENST00000340477 MEX3AA1L020 520 aaKnown RBP15.69■□□□□ 0.1
SYNE4-202ENST00000340477 CLPXO76031 633 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 RNASE1P07998 156 aaKnown RBP15.69■□□□□ 0.1
SYNE4-202ENST00000340477 UCHL1P09936 223 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 SRMP19623 302 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 RPS25P62851 125 aaKnown RBP15.69■□□□□ 0.1
SYNE4-202ENST00000340477 AESQ08117 197 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 INSL4Q14641 139 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 SLC9A3R2Q15599 337 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 PIP4P2Q8N4L2 257 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 FCGR1BQ92637 280 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 GCDHQ92947 438 aaPredicted RBP15.69■□□□□ 0.1
SYNE4-202ENST00000340477 CST11Q9H112 138 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 DPAGT1Q9H3H5 408 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 SPACA1Q9HBV2 294 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 OR6C3Q9NZP0 311 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 GHRLQ9UBU3 117 aa15.69■□□□□ 0.1
SYNE4-202ENST00000340477 ODAMA1E959 279 aa15.68■□□□□ 0.1
SYNE4-202ENST00000340477 CRTAPO75718 401 aaPredicted RBP15.68■□□□□ 0.1
SYNE4-202ENST00000340477 SC5DO75845 299 aa15.68■□□□□ 0.1
SYNE4-202ENST00000340477 MELTFP08582 738 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms