RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 WDR86Q86TI4 376 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 FAM185AQ8N0U4 392 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 SPERTQ8NA61 448 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 SCCPDHQ8NBX0 429 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 OR8G5Q8NG78 346 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 CCDC120Q96HB5 630 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 SYT3Q9BQG1 590 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 SUCNR1Q9BXA5 334 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 NAA60Q9H7X0 242 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 IL36RNQ9UBH0 155 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 KIF25Q9UIL4 384 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 KCNIP3Q9Y2W7 256 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 MEMO1Q9Y316 297 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 ATP23Q9Y6H3 246 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 A0A1B0GWJ7 208 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 TRDCB7Z8K6 153 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 H7C1Q1 480 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 K7EM74 188 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 AGFG2O95081 481 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 HERV-K104P61576 105 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 UBA52P62987 128 aaKnown RBP16.53■□□□□ 0.24
HOXC4-201ENST00000303406 OR8G1Q15617 311 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 ABCA11PQ4W5N1 156 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 MBNL2Q5VZF2 373 aaKnown RBP16.53■□□□□ 0.24
HOXC4-201ENST00000303406 Q6P435 159 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 BATF2Q8N1L9 274 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 LRTM2Q8N967 370 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 CCDC71LQ8N9Z2 235 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 NRIP2Q9BQI9 281 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 TMEM100Q9NV29 134 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 RDH8Q9NYR8 311 aa16.53■□□□□ 0.24
HOXC4-201ENST00000303406 TRAV24A0A0B4J272 114 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 IGHV2OR16-5A0A0B4J2B6 119 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 IGHV1-18A0A0C4DH31 117 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 TEX13DA0A0J9YY54 714 aaPredicted RBP16.52■□□□□ 0.24
HOXC4-201ENST00000303406 C13orf42A0A1B0GVH6 325 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 SLC34A2O95436 690 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 MPV17P39210 176 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 PIGPP57054 158 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 FOXC1Q12948 553 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 IL15RAQ13261 267 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 ZNF718Q3SXZ3 478 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 TIMM23BQ5SRD1 257 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 POC1AQ8NBT0 407 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 MRPL30Q8TCC3 161 aaKnown RBP16.52■□□□□ 0.24
HOXC4-201ENST00000303406 SCARB1Q8WTV0 552 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 ZNF488Q96MN9 340 aa16.52■□□□□ 0.24
HOXC4-201ENST00000303406 METTL8Q9H825 291 aaKnown RBP16.52■□□□□ 0.24
HOXC4-201ENST00000303406 MUC6Q6W4X9 2439 aa16.52■□□□□ 0.23
HOXC4-201ENST00000303406 BCL2L11O43521 198 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 ADAP1O75689 374 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 RHBDL1O75783 438 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 DIRAS3O95661 229 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 PPYP01298 95 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 TK1P04183 234 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 ZNF154Q13106 437 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 ZNF146Q15072 292 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 SPIN3Q5JUX0 258 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 MOB1BQ7L9L4 216 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 TOMM40LQ969M1 308 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 TLNRD1Q9H1K6 362 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 CXXC4Q9H2H0 198 aa16.51■□□□□ 0.23
HOXC4-201ENST00000303406 KANTRA0A1W2PQU2 76 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 RNF222A6NCQ9 220 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 DEGS1O15121 323 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 TUSC2O75896 110 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 PET100P0DJ07 73 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 AADACP22760 399 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 RND3P61587 244 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 MZT1Q08AG7 82 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 TMEM187Q14656 261 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 ALKBH6Q3KRA9 238 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 LRRC37A5PQ49AS3 106 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 PRSS54Q6PEW0 395 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 SPACA3Q8IXA5 215 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 GAPTQ8N292 157 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 INO80EQ8NBZ0 244 aaPredicted RBP16.5■□□□□ 0.23
HOXC4-201ENST00000303406 NEK7Q8TDX7 302 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 RTN4IP1Q8WWV3 396 aaPredicted RBP16.5■□□□□ 0.23
HOXC4-201ENST00000303406 HES4Q9HCC6 221 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 MBD2Q9UBB5 411 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 IFNA21P01568 189 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 ZNF474Q6S9Z5 364 aaPredicted RBP16.5■□□□□ 0.23
HOXC4-201ENST00000303406 FIP1L1Q6UN15 594 aaKnown RBP16.5■□□□□ 0.23
HOXC4-201ENST00000303406 OR4A4PQ8NGN8 299 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 C1QTNF6Q9BXI9 259 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 SLC2A9Q9NRM0 540 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 RASL12Q9NYN1 266 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 PCDHB10Q9UN67 800 aa16.5■□□□□ 0.23
HOXC4-201ENST00000303406 GCH1P30793 250 aa16.49■□□□□ 0.23
HOXC4-201ENST00000303406 KCNJ3P48549 501 aa16.49■□□□□ 0.23
HOXC4-201ENST00000303406 AP2S1P53680 142 aaPredicted RBP16.49■□□□□ 0.23
HOXC4-201ENST00000303406 FXYD4P59646 89 aa16.49■□□□□ 0.23
HOXC4-201ENST00000303406 HLA-DRB3P79483 266 aa16.49■□□□□ 0.23
HOXC4-201ENST00000303406 ESCO2Q56NI9 601 aa16.49■□□□□ 0.23
HOXC4-201ENST00000303406 IGSF11Q5DX21 431 aa16.49■□□□□ 0.23
HOXC4-201ENST00000303406 ABHD17AQ96GS6 310 aa16.49■□□□□ 0.23
HOXC4-201ENST00000303406 OR10C1Q96KK4 312 aa16.49■□□□□ 0.23
HOXC4-201ENST00000303406 CABLES2Q9BTV7 478 aa16.49■□□□□ 0.23
HOXC4-201ENST00000303406 RNF126Q9BV68 326 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms