RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 CALHM1Q8IU99 346 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 NUDT8Q8WV74 236 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 SIGLEC11Q96RL6 698 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 TOLLIPQ9H0E2 274 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 FOXJ3Q9UPW0 622 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 hADV38S2A0JD32 116 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 TIAL1Q01085 375 aaKnown RBP eCLIP10.76□□□□□ -0.69
PCF11-201ENST00000298281 RNPS1Q15287 305 aaKnown RBP10.76□□□□□ -0.69
PCF11-201ENST00000298281 DUSP21Q9H596 190 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 ZNF737O75373 536 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 AESQ08117 197 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 OR4P4Q8NGL7 312 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 FGF20Q9NP95 211 aaPredicted RBP10.76□□□□□ -0.69
PCF11-201ENST00000298281 SLC16A12Q6ZSM3 486 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 TM4SF19Q96DZ7 209 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 TRAV8-7A0A075B6U6 113 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 IGSF23A1L1A6 192 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 GEMIN2O14893 280 aaKnown RBP10.76□□□□□ -0.69
PCF11-201ENST00000298281 GAB4Q2WGN9 574 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 OR4D9Q8NGE8 314 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 TMPRSS13Q9BYE2 586 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 TRAV20A0A0B4J274 112 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 WFDC5Q8TCV5 224 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 PRR32B1ATL7 298 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 LANCL1O43813 399 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 SUMO2P61956 95 aaKnown RBP10.76□□□□□ -0.69
PCF11-201ENST00000298281 HIST3H3Q16695 136 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 DIRC2Q96SL1 478 aa10.76□□□□□ -0.69
PCF11-201ENST00000298281 IGHV3-43A0A0B4J1X8 118 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 IGHV3-43DP0DP04 118 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 GNG3P63215 75 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 DEFB124Q8NES8 71 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 POLR2AP24928 1970 aaKnown RBP10.75□□□□□ -0.69
PCF11-201ENST00000298281 GABRB1P18505 474 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 ZNF324BQ6AW86 544 aaPredicted RBP10.75□□□□□ -0.69
PCF11-201ENST00000298281 TCTN3Q6NUS6 607 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 C16orf82Q7Z2V1 217 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 NT5CQ8TCD5 201 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 MZB1Q8WU39 189 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 TMEM171Q8WVE6 324 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 TAAR9Q96RI9 348 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 TDRD15B5MCY1 1934 aaKnown RBP10.75□□□□□ -0.69
PCF11-201ENST00000298281 PSMB11A5LHX3 300 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 SLC25A20O43772 301 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 KLK8O60259 260 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 LGALS3P17931 250 aaKnown RBP10.75□□□□□ -0.69
PCF11-201ENST00000298281 GGTLC2Q14390 218 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 TMEM240Q5SV17 173 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 SLC17A5Q9NRA2 495 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 UQCC1Q9NVA1 299 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 PLA2G3Q9NZ20 509 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 HEATR5AQ86XA9 2040 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 NCOR1O75376 2440 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 MASP2O00187 686 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 NPFFO15130 113 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 CA2P00918 260 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 IGLV3-27P01718 113 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 TMIGD3P0DMS9 266 aaPredicted RBP10.75□□□□□ -0.69
PCF11-201ENST00000298281 DGCR2P98153 550 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 LAMTOR1Q6IAA8 161 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 DUX5Q96PT3 197 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 ZNF768Q9H5H4 540 aaKnown RBP10.75□□□□□ -0.69
PCF11-201ENST00000298281 DNAJB12Q9NXW2 375 aaKnown RBP10.75□□□□□ -0.69
PCF11-201ENST00000298281 TRAV38-1A0A0B4J264 116 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 B3GALT4O96024 378 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 PGA3P0DJD8 388 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 MALP21145 153 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 CA6P23280 308 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 CDAP32320 146 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 NXPH1P58417 271 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 OR13G1Q8NGZ3 307 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 HIST1H4GQ99525 98 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 TMEM191AQ9H0A3 160 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 PDFQ9HBH1 243 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 RGPD1P0DJD0 1748 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 SMAD7O15105 426 aaKnown RBP10.75□□□□□ -0.69
PCF11-201ENST00000298281 ZNF205O95201 554 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 FUT3P21217 361 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 ASB5Q8WWX0 329 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 HGDQ93099 445 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 ZNF385DQ9H6B1 395 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 POMT2Q9UKY4 750 aa10.75□□□□□ -0.69
PCF11-201ENST00000298281 DDX60Q8IY21 1712 aaKnown RBP10.75□□□□□ -0.69
PCF11-201ENST00000298281 NGFP01138 241 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 RPS4Y1P22090 263 aaKnown RBP10.74□□□□□ -0.69
PCF11-201ENST00000298281 SPEM2Q0P670 501 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 RFESDQ8TAC1 157 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 RND1Q92730 232 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 ALX4Q9H161 411 aaPredicted RBP10.74□□□□□ -0.69
PCF11-201ENST00000298281 ERVS71-1P61550 626 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 SNRPNP63162 240 aaKnown RBP10.74□□□□□ -0.69
PCF11-201ENST00000298281 TMEM229BQ8NBD8 167 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 NOXO1Q8NFA2 376 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 ADAMTSL3P82987 1691 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 TCL1AP56279 114 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 PHYHIPLQ96FC7 376 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 PRO1933Q9H354 126 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 PHLDA3Q9Y5J5 127 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 PRRT4C9JH25 899 aa10.74□□□□□ -0.69
PCF11-201ENST00000298281 UPK1AO00322 258 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms