RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 PHOSPHO2Q8TCD6 241 aa13.78□□□□□ -0.2
USP43-201ENST00000285199 TMEM68Q96MH6 324 aa13.78□□□□□ -0.2
USP43-201ENST00000285199 MS4A10Q96PG2 267 aa13.78□□□□□ -0.2
USP43-201ENST00000285199 MFRPQ9BY79 579 aa13.78□□□□□ -0.2
USP43-201ENST00000285199 PISDQ9UG56 409 aa13.78□□□□□ -0.2
USP43-201ENST00000285199 TIMM10BQ9Y5J6 103 aa13.78□□□□□ -0.2
USP43-201ENST00000285199 ZNF737O75373 536 aa13.78□□□□□ -0.2
USP43-201ENST00000285199 SLC7A10Q9NS82 523 aa13.78□□□□□ -0.2
USP43-201ENST00000285199 A0A1W2PQF6 199 aa13.77□□□□□ -0.2
USP43-201ENST00000285199 CD1AP06126 327 aa13.77□□□□□ -0.2
USP43-201ENST00000285199 RAB30Q15771 203 aa13.77□□□□□ -0.2
USP43-201ENST00000285199 TMEM241Q24JQ0 296 aa13.77□□□□□ -0.2
USP43-201ENST00000285199 H2BFWTQ7Z2G1 175 aa13.77□□□□□ -0.2
USP43-201ENST00000285199 UHRF2Q96PU4 802 aa13.77□□□□□ -0.2
USP43-201ENST00000285199 RNF126Q9BV68 326 aa13.77□□□□□ -0.2
USP43-201ENST00000285199 PARD6AQ9NPB6 346 aa13.77□□□□□ -0.2
USP43-201ENST00000285199 CREBBPQ92793 2442 aa13.77□□□□□ -0.2
USP43-201ENST00000285199 LIPT2A6NK58 231 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 DEFB108AA8MXU0 73 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 ZNF814B7Z6K7 855 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 RAB4AP20338 218 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 PMCHP20382 165 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 WIPI1Q5MNZ9 446 aaPredicted RBP13.77□□□□□ -0.21
USP43-201ENST00000285199 ZNF385AQ96PM9 386 aaKnown RBP13.77□□□□□ -0.21
USP43-201ENST00000285199 PCNX1Q96RV3 2341 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.77□□□□□ -0.21
USP43-201ENST00000285199 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.77□□□□□ -0.21
USP43-201ENST00000285199 MPPED1O15442 326 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 PPYP01298 95 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 P2RY1P47900 373 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 ZNF92Q03936 586 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 CATR1Q13166 79 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 ATG101Q9BSB4 218 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 TRAPPC1Q9Y5R8 145 aa13.77□□□□□ -0.21
USP43-201ENST00000285199 A0A1W2PPE3 182 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 CRYAAP02489 173 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 SLC25A6P12236 298 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 HIST1H3AP68431 136 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 IL13RA2Q14627 380 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 FBXO46Q6PJ61 603 aaPredicted RBP13.76□□□□□ -0.21
USP43-201ENST00000285199 LHFPL2Q6ZUX7 228 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 OR1F12Q8NHA8 337 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 MTCH1Q9NZJ7 389 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 YBX2Q9Y2T7 364 aaKnown RBP13.76□□□□□ -0.21
USP43-201ENST00000285199 INTS1Q8N201 2190 aaKnown RBP13.76□□□□□ -0.21
USP43-201ENST00000285199 PDCD6O75340 191 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 ACTL6BO94805 426 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 SEC11BP0C7V7 166 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 SPACA9Q96E40 222 aaPredicted RBP13.76□□□□□ -0.21
USP43-201ENST00000285199 RTN4RQ9BZR6 473 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 PTPRDP23468 1912 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 SMIM10L1P0DMW3 83 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 GALNSP34059 522 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 RND3P61587 244 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 IFI44Q8TCB0 444 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 SMIM10Q96HG1 83 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 ABHD14AQ9BUJ0 271 aa13.76□□□□□ -0.21
USP43-201ENST00000285199 ROM1Q03395 351 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 BSXQ3C1V8 233 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 ZNF600Q6ZNG1 722 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 GPX7Q96SL4 187 aaPredicted RBP13.75□□□□□ -0.21
USP43-201ENST00000285199 G6PC2Q9NQR9 355 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 DOCK10Q96BY6 2186 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 RAMP1O60894 148 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 DXOO77932 396 aaKnown RBP13.75□□□□□ -0.21
USP43-201ENST00000285199 CLDN15P56746 228 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 C1orf100Q5SVJ3 147 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 OR4A16Q8NH70 328 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 FOXB1Q99853 325 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 GPR27Q9NS67 375 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 PAM16Q9Y3D7 125 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 RFNGQ9Y644 331 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 POMT1Q9Y6A1 747 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 DEDDO75618 318 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 LYPD3O95274 346 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 HABP2Q14520 560 aaPredicted RBP13.75□□□□□ -0.21
USP43-201ENST00000285199 PRAMEF5Q5TYX0 476 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 PRAMEF6Q5VXH4 476 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 FAM58AQ8N1B3 248 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 AQP10Q96PS8 301 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 MYOTQ9UBF9 498 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 CACFD1Q9UGQ2 172 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 PAX6P26367 422 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 RNF144BQ7Z419 303 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 PINX1Q96BK5 328 aaKnown RBP13.75□□□□□ -0.21
USP43-201ENST00000285199 ZNF488Q96MN9 340 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 ELOVL1Q9BW60 279 aa13.75□□□□□ -0.21
USP43-201ENST00000285199 CACNA1BQ00975 2339 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 VAMP5O95183 116 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 SNCAP37840 140 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 TIPARPQ7Z3E1 657 aaKnown RBP13.74□□□□□ -0.21
USP43-201ENST00000285199 TMEM252Q8N6L7 170 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 OR10V1Q8NGI7 309 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 BORCS7Q96B45 105 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 MESP1Q9BRJ9 268 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 FSCN3Q9NQT6 498 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 MT-CO2P00403 227 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 SNRPCP09234 159 aaKnown RBP13.74□□□□□ -0.21
USP43-201ENST00000285199 FFAR4Q5NUL3 377 aa13.74□□□□□ -0.21
USP43-201ENST00000285199 PRR27Q6MZM9 219 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms