RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 VAX2Q9UIW0 290 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 OR10J1P30954 320 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 HOXA6P31267 233 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 TBC1D26Q86UD7 250 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 MCHR2Q969V1 340 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 SMIM12Q96EX1 92 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 ST6GAL2Q96JF0 529 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 MRGPRX1Q96LB2 322 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 TSPAN32Q96QS1 320 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 CNTD2Q9H8S5 307 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM9BQ9NQ34 198 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 THYN1Q9P016 225 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM238LA0A1B0GVL6 79 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 LINC01553A4QN01 128 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 LINC00862A6NCI5 91 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 A6NJY4 79 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 H0Y8X5 98 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 FAM3BP58499 235 aaPredicted RBP4.27□□□□□ -1.73
RC3H1-201ENST00000258349 SPATA46Q5T0L3 261 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 BPIFA4PQ86YQ2 179 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 CARFQ8N187 725 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 OR10V1Q8NGI7 309 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 MRPL37Q9BZE1 423 aaKnown RBP4.27□□□□□ -1.73
RC3H1-201ENST00000258349 OR6C3Q9NZP0 311 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 LOXL2Q9Y4K0 774 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 EP300Q09472 2414 aaPredicted RBP4.27□□□□□ -1.73
RC3H1-201ENST00000258349 ETFBKMTQ8IXQ9 262 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 LSMEM1Q8N8F7 131 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 OR10G8Q8NGN5 311 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 OR13G1Q8NGZ3 307 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 MRGPRX3Q96LB0 322 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 TMPRSS13Q9BYE2 586 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 PRO1933Q9H354 126 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM265A0A087WTH1 108 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 POU2F2P09086 479 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 SBK3P0C264 359 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 HIST1H1EP10412 219 aaKnown RBP4.27□□□□□ -1.73
RC3H1-201ENST00000258349 CRISP2P16562 243 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 LPAR6P43657 344 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 SELENOPP49908 381 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM33P57088 247 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 UBALD2Q8IYN6 164 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 LINC00052Q96N35 136 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 PECRQ9BY49 303 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM191AQ9H0A3 160 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 AP5S1Q9NUS5 200 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 IL36GQ9NZH8 169 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 NAGKQ9UJ70 344 aa4.27□□□□□ -1.73
RC3H1-201ENST00000258349 ALG1L2C9J202 215 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 EPPINO95925 133 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 OR6X1Q8NH79 312 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 SPPL3Q8TCT6 385 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 PRSS50Q9UI38 385 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 ANXA10Q9UJ72 324 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 HIST1H1BP16401 226 aaKnown RBP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 PCBP3P57721 371 aaKnown RBP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 LSM11P83369 360 aaKnown RBP eCLIP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 PRDX4Q13162 271 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 FAM109BQ6ICB4 259 aaPredicted RBP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 RBPMS2Q6ZRY4 209 aaKnown RBP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 ASCL5Q7RTU5 278 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 VASH2Q86V25 355 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 OR5AU1Q8NGC0 362 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 DEFB127Q9H1M4 99 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 SLC6A13Q9NSD5 602 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF716A6NP11 495 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 NDUFB3O43676 98 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 FCMRO60667 390 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 DUSP2Q05923 314 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF707Q96C28 371 aaPredicted RBP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 GLRX2Q9NS18 164 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 H3BP45 60 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 BMPR1BO00238 502 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 HAND1O96004 215 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 P01737 135 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 MEOX1P50221 254 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF117Q03924 483 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 SLC35E3Q7Z769 313 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 PARP11Q9NR21 331 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 SIRT5Q9NXA8 310 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 WASHC3Q9Y3C0 194 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 PLCE1Q9P212 2302 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 C5orf52A6NGY3 159 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 PRRT4C9JH25 899 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 CLDN18P56856 261 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 PRICKLE4Q2TBC4 344 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 FAM24BQ8N5W8 94 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 PPIL1Q9Y3C6 166 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 V9GYH0 126 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 HELTA6NFD8 242 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 HMGA2P52926 109 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 ALKBH6Q3KRA9 238 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 OVCH2Q7RTZ1 564 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 FBXL6Q8N531 539 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 STXBP6Q8NFX7 210 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 OR4D9Q8NGE8 314 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 CNRIP1Q96F85 164 aaPredicted RBP4.26□□□□□ -1.73
RC3H1-201ENST00000258349 RSRP1Q9BUV0 290 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 C1QTNF6Q9BXI9 259 aa4.26□□□□□ -1.73
RC3H1-201ENST00000258349 CXXC4Q9H2H0 198 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms