RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ZNF561Q8N587 486 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 NUBPLQ8TB37 319 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 RGPD4Q7Z3J3 1758 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 LOC102724200A0A096LPH7 203 aaPredicted RBP11.68□□□□□ -0.54
COL1A1-201ENST00000225964 CST2P09228 141 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 PLAURQ03405 335 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 MMP26Q9NRE1 261 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 CLN8Q9UBY8 286 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 HAX1O00165 279 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 PRSS1P07477 247 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 PRSS42Q7Z5A4 293 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 ZNF547Q8IVP9 402 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 GVQW1Q8N7I0 195 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 OR4C5Q8NGB2 326 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 RAB32Q13637 225 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 SLC26A10Q8NG04 563 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 SLC25A10Q9UBX3 287 aaPredicted RBP11.67□□□□□ -0.54
COL1A1-201ENST00000225964 CST4P01036 141 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 AANATQ16613 207 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 NUP37Q8NFH4 326 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 DUSP21Q9H596 190 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 ZNF831Q5JPB2 1677 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 UBE2L6O14933 153 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 ADRA2AP08913 450 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 TFPI2P48307 235 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 SPICQ8N5J4 248 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 MS4A5Q9H3V2 200 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 C5orf52A6NGY3 159 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 VDAC1P21796 283 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 GPR6P46095 362 aaPredicted RBP11.67□□□□□ -0.54
COL1A1-201ENST00000225964 HERVK_113P61574 105 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 SF3B5Q9BWJ5 86 aaKnown RBP11.67□□□□□ -0.54
COL1A1-201ENST00000225964 WDR13Q9H1Z4 485 aa11.67□□□□□ -0.54
COL1A1-201ENST00000225964 TECRQ9NZ01 308 aaKnown RBP11.67□□□□□ -0.54
COL1A1-201ENST00000225964 ZMAT5Q9UDW3 170 aaKnown RBP11.67□□□□□ -0.54
COL1A1-201ENST00000225964 MRPS18BQ9Y676 258 aaKnown RBP11.67□□□□□ -0.54
COL1A1-201ENST00000225964 GEMIN2O14893 280 aaKnown RBP11.66□□□□□ -0.54
COL1A1-201ENST00000225964 ATP6V1FQ16864 119 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 FAM78BQ5VT40 261 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 COX14Q96I36 57 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 GPR35Q9HC97 309 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 MYH14Q7Z406 1995 aaKnown RBP11.66□□□□□ -0.54
COL1A1-201ENST00000225964 PLPP2O43688 288 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 GP1BAP07359 652 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 ZFP36L2P47974 494 aaKnown RBP11.66□□□□□ -0.54
COL1A1-201ENST00000225964 REG1BP48304 166 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 IL13RA2Q14627 380 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 HARBI1Q96MB7 349 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 OR2H1Q9GZK4 316 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 ZNF552Q9H707 407 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-201ENST00000225964 PSG5Q15238 335 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 RRN3P1Q2M238 152 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 STPG1Q5TH74 334 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 C16orf82Q7Z2V1 217 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 DPH3Q96FX2 82 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 PRDM14Q9GZV8 571 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 PRR13Q9NZ81 148 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 COL22A1Q8NFW1 1626 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-201ENST00000225964 IGLV3-16A0A075B6K0 115 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 LIPT2A6NK58 231 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 ZFPL1O95159 310 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 NTN1O95631 604 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 HIST1H1EP10412 219 aaKnown RBP11.66□□□□□ -0.54
COL1A1-201ENST00000225964 PNLIPP16233 465 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 PCMT1P22061 227 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 C10orf113Q5VZT2 155 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 OR4P4Q8NGL7 312 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 MMP24Q9Y5R2 645 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 ERVS71-1P61550 626 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 ZNF426Q9BUY5 554 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 DUSP15Q9H1R2 295 aaPredicted RBP11.66□□□□□ -0.54
COL1A1-201ENST00000225964 TMEM167BQ9NRX6 74 aa11.66□□□□□ -0.54
COL1A1-201ENST00000225964 NDUFB6O95139 128 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 COL10A1Q03692 680 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 COL13A1Q5TAT6 717 aaPredicted RBP11.65□□□□□ -0.54
COL1A1-201ENST00000225964 C19orf48Q6RUI8 117 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 SMIM12Q96EX1 92 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 NRTNQ99748 197 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 TTTY12Q9BZ98 90 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 IGHV3OR16-12A0A075B7B8 117 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 M0R2Z0 102 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 CCKARP32238 428 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 MDP1Q86V88 176 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 OR8I2Q8N0Y5 310 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 D2HGDHQ8N465 521 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 OR4X1Q8NH49 305 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 ZG16BQ96DA0 208 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 GSX1Q9H4S2 264 aaPredicted RBP11.65□□□□□ -0.54
COL1A1-201ENST00000225964 PDE4DIPQ5VU43 2346 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 PEX11BO96011 259 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 ACAA2P42765 397 aaKnown RBP11.65□□□□□ -0.54
COL1A1-201ENST00000225964 RNF165Q6ZSG1 346 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 GMPPAQ96IJ6 420 aaPredicted RBP11.65□□□□□ -0.54
COL1A1-201ENST00000225964 PARP11Q9NR21 331 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 WNT3P56703 355 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 RNF212Q495C1 297 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 DEGS2Q6QHC5 323 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 OR2C3Q8N628 320 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 MAP6Q96JE9 813 aa11.65□□□□□ -0.54
COL1A1-201ENST00000225964 NPAS1Q99742 590 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms