RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 PSMB9P28065 219 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 OR3A4PP47883 348 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 KCNJ3P48549 501 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 CEBPDP49716 269 aaPredicted RBP6.45□□□□□ -1.38
NR1I3-235ENST00000628566 ZP1P60852 638 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 EMX1Q04741 257 aaPredicted RBP6.45□□□□□ -1.38
NR1I3-235ENST00000628566 EDDM3AQ14507 147 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 MPV17LQ2QL34 196 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 KRTAP21-3Q3LHN1 58 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 SLC22A6Q4U2R8 563 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 UNQ9370/PRO34162Q6UXP9 181 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 USP43Q70EL4 1123 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 TRAPPC6BQ86SZ2 158 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 PHC2Q8IXK0 858 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 SPARTQ8N0X7 666 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 SGCDQ92629 289 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 NR1H4Q96RI1 486 aaPredicted RBP6.45□□□□□ -1.38
NR1I3-235ENST00000628566 BARHL1Q9BZE3 327 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 GAL3ST2Q9H3Q3 398 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 OPN4Q9UHM6 478 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 ST3GAL6Q9Y274 331 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 MRPS28Q9Y2Q9 187 aaKnown RBP6.45□□□□□ -1.38
NR1I3-235ENST00000628566 CSPG4Q6UVK1 2322 aa6.45□□□□□ -1.38
NR1I3-235ENST00000628566 MTORP42345 2549 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 MALRD1Q5VYJ5 2156 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 TRGV10A0A0A0MS01 117 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 IGKV1-12A0A0C4DH73 117 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 A0A1B0GW55 424 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 F8VVB4 439 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 F8VWA3 439 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 TRIM77I1YAP6 450 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 SIRPB1O00241 398 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 CDRT1O95170 752 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 OR2H2O95918 312 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 AVPP01185 164 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 IGKV1D-12P01611 117 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 RBP4P02753 201 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 CSN2P05814 226 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 SFTPBP07988 381 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 DUX4L2P0CJ85 424 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 DUX4L3P0CJ86 424 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 DUX4L4P0CJ87 422 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 DUX4L5P0CJ88 424 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 DUX4L6P0CJ89 424 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 DUX4L7P0CJ90 424 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 SELLP14151 372 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 LMO1P25800 156 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 CALRP27797 417 aaKnown RBP6.44□□□□□ -1.38
NR1I3-235ENST00000628566 DUSP1P28562 367 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 ERP29P30040 261 aaKnown RBP6.44□□□□□ -1.38
NR1I3-235ENST00000628566 P2RX3P56373 397 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 ERVFRD-1P60508 538 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 RPS25P62851 125 aaKnown RBP6.44□□□□□ -1.38
NR1I3-235ENST00000628566 RBM39Q14498 530 aaKnown RBP6.44□□□□□ -1.38
NR1I3-235ENST00000628566 FAM189A2Q15884 450 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 PAN3Q58A45 887 aaKnown RBP6.44□□□□□ -1.38
NR1I3-235ENST00000628566 NHLRC3Q5JS37 347 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 UBE2UQ5VVX9 321 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 DUX4L9Q6RFH8 374 aaPredicted RBP6.44□□□□□ -1.38
NR1I3-235ENST00000628566 METAP1DQ6UB28 335 aaPredicted RBP6.44□□□□□ -1.38
NR1I3-235ENST00000628566 GLIPR1L1Q6UWM5 242 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 ASCL4Q6XD76 172 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 VMO1Q7Z5L0 202 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 Q8NFD4 153 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 OR4M1Q8NGD0 313 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 OR51T1Q8NGJ9 327 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 OR6M1Q8NGM8 313 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 TMEM158Q8WZ71 300 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 LHX4Q969G2 390 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 MUL1Q969V5 352 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 ZDHHC16Q969W1 377 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 DACT3Q96B18 629 aaPredicted RBP6.44□□□□□ -1.38
NR1I3-235ENST00000628566 ZNF714Q96N38 554 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 SIRPDQ9H106 197 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 HEXA-AS1Q9H8Q6 139 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 ZMAT3Q9HA38 289 aaKnown RBP6.44□□□□□ -1.38
NR1I3-235ENST00000628566 PLGRKTQ9HBL7 147 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 RAB9BQ9NP90 201 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 NDUFB11Q9NX14 153 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 OR6C3Q9NZP0 311 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 DUX4Q9UBX2 424 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 SSR3Q9UNL2 185 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 UBE2J1Q9Y385 318 aaPredicted RBP6.44□□□□□ -1.38
NR1I3-235ENST00000628566 SF3B6Q9Y3B4 125 aaKnown RBP6.44□□□□□ -1.38
NR1I3-235ENST00000628566 FAM96BQ9Y3D0 163 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 LINC00312Q9Y6C7 94 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 TLN2Q9Y4G6 2542 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 NF1P21359 2839 aa6.44□□□□□ -1.38
NR1I3-235ENST00000628566 IGHV1-69DA0A0B4J2H0 117 aa6.43□□□□□ -1.38
NR1I3-235ENST00000628566 A0A0G2JK05 382 aa6.43□□□□□ -1.38
NR1I3-235ENST00000628566 FAM90A10PA6NDY2 464 aa6.43□□□□□ -1.38
NR1I3-235ENST00000628566 BTBD17A6NE02 478 aa6.43□□□□□ -1.38
NR1I3-235ENST00000628566 FAM90A18PA6NE21 464 aa6.43□□□□□ -1.38
NR1I3-235ENST00000628566 FAM90A16PA6NEW6 464 aa6.43□□□□□ -1.38
NR1I3-235ENST00000628566 FAM90A20PA6NIJ5 464 aa6.43□□□□□ -1.38
NR1I3-235ENST00000628566 FAM90A8PA6NJQ4 464 aa6.43□□□□□ -1.38
NR1I3-235ENST00000628566 FAM90A7PA6NKC0 464 aa6.43□□□□□ -1.38
NR1I3-235ENST00000628566 FAM90A22PA8MWA6 464 aa6.43□□□□□ -1.38
NR1I3-235ENST00000628566 FAM90A12PA8MX19 464 aa6.43□□□□□ -1.38
NR1I3-235ENST00000628566 FAM90A5PA8MXJ8 464 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms