RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 FBXW12Q6X9E4 464 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 MYPOPQ86VE0 399 aaPredicted RBP16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 ZNF573Q86YE8 665 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 ST8SIA2Q92186 375 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 C1orf123Q9NWV4 160 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 SYNGR1O43759 233 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 CELA3BP08861 270 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 ZNF728P0DKX0 622 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 IL32P24001 234 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 FCGR2CP31995 323 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 RBMXP38159 391 aaKnown RBP16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 GABRA6Q16445 453 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 HAGHLQ6PII5 290 aaPredicted RBP16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 Q6ZS49 121 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 OR5M9Q8NGP3 310 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 OR10C1Q96KK4 312 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 C2orf50Q96LR7 162 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 ARPC5LQ9BPX5 153 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 RNF126Q9BV68 326 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 WDR13Q9H1Z4 485 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 PLK3Q9H4B4 646 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 ZFHX4Q86UP3 3567 aa16.87■□□□□ 0.29
PCDHB11-202ENST00000624887 LYZL6O75951 148 aa16.87■□□□□ 0.29
PCDHB11-202ENST00000624887 RLN2P04090 185 aa16.87■□□□□ 0.29
PCDHB11-202ENST00000624887 SRSF7Q16629 238 aaKnown RBP eCLIP16.87■□□□□ 0.29
PCDHB11-202ENST00000624887 WNT2BQ93097 391 aa16.87■□□□□ 0.29
PCDHB11-202ENST00000624887 TOMM40LQ969M1 308 aa16.87■□□□□ 0.29
PCDHB11-202ENST00000624887 MICU1Q9BPX6 476 aa16.87■□□□□ 0.29
PCDHB11-202ENST00000624887 TEX13DA0A0J9YY54 714 aaPredicted RBP16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 SMPD2O60906 423 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 ZNF205O95201 554 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 KIR2DL2P43627 348 aaPredicted RBP16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 PIGPP57054 158 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 IL24Q13007 206 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 BEX5Q5H9J7 111 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 SPATA46Q5T0L3 261 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 INO80CQ6PI98 192 aaPredicted RBP16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 LINC00596Q86U02 117 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 IQCF2Q8IXL9 164 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 CNEP1R1Q8N9A8 125 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 C9orf106Q8NAJ2 232 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 POC1AQ8NBT0 407 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 PIK3IP1Q96FE7 263 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 PKIBQ9C010 78 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 MED9Q9NWA0 146 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 IL36RNQ9UBH0 155 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 A0A1W2PR80 420 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 H0YIZ8 118 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 NAPSAO96009 420 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 LYL1P12980 280 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 HOXB1P14653 301 aaPredicted RBP16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 CA6P23280 308 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 GLP1RP43220 463 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 IDH3GP51553 393 aaPredicted RBP16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 UCP3P55916 312 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 IL15RAQ13261 267 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 RGS7BPQ6MZT1 257 aaPredicted RBP16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 DCUN1D4Q92564 292 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 MOB3AQ96BX8 217 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 OR51I2Q9H344 312 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 CDH20Q9HBT6 801 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 LHX6Q9UPM6 363 aa16.86■□□□□ 0.29
PCDHB11-202ENST00000624887 ASPMQ8IZT6 3477 aa16.85■□□□□ 0.29
PCDHB11-202ENST00000624887 GFRA3O60609 400 aa16.85■□□□□ 0.29
PCDHB11-202ENST00000624887 HOXB5P09067 269 aa16.85■□□□□ 0.29
PCDHB11-202ENST00000624887 CTRB1P17538 263 aa16.85■□□□□ 0.29
PCDHB11-202ENST00000624887 CTRB2Q6GPI1 263 aa16.85■□□□□ 0.29
PCDHB11-202ENST00000624887 ZADH2Q8N4Q0 377 aa16.85■□□□□ 0.29
PCDHB11-202ENST00000624887 CCDC120Q96HB5 630 aa16.85■□□□□ 0.29
PCDHB11-202ENST00000624887 BOD1Q96IK1 185 aa16.85■□□□□ 0.29
PCDHB11-202ENST00000624887 ZNF250P15622 560 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 PRKACAP17612 351 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 COX5AP20674 150 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 FXYD4P59646 89 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 PPP1CBP62140 327 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 RBM39Q14498 530 aaKnown RBP16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 PRSS54Q6PEW0 395 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 LHFPL5Q8TAF8 219 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 GALNT14Q96FL9 552 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 TAAR6Q96RI8 345 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 NAA60Q9H7X0 242 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 Q9N2K0 584 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 KCNIP3Q9Y2W7 256 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 AHRRA9YTQ3 701 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 LUMP51884 338 aaPredicted RBP16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 ZNF169Q14929 603 aaPredicted RBP16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 ACSF3Q4G176 576 aaPredicted RBP16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 ABCA11PQ4W5N1 156 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 OR2A2Q6IF42 318 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 VWA1Q6PCB0 445 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 RTN4IP1Q8WWV3 396 aaPredicted RBP16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 ZNF471Q9BX82 626 aaPredicted RBP16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 OR2J1Q9GZK6 312 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 SPACA1Q9HBV2 294 aa16.84■□□□□ 0.29
PCDHB11-202ENST00000624887 CUL9Q8IWT3 2517 aa16.83■□□□□ 0.29
PCDHB11-202ENST00000624887 CACNA1GO43497 2377 aa16.83■□□□□ 0.29
PCDHB11-202ENST00000624887 PRRC2CQ9Y520 2896 aaKnown RBP16.83■□□□□ 0.28
PCDHB11-202ENST00000624887 hCG_1807616A0A1W2PRN6 198 aa16.83■□□□□ 0.28
PCDHB11-202ENST00000624887 POM121CA8CG34 1229 aa16.83■□□□□ 0.28
PCDHB11-202ENST00000624887 IL13RA2Q14627 380 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms