RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SLC6A13Q9NSD5 602 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 ABCA3Q99758 1704 aa7.77□□□□□ -1.16
CSMD1-216ENST00000602557 CFDP00746 253 aaPredicted RBP7.77□□□□□ -1.16
CSMD1-216ENST00000602557 FAM87AP0C7U9 286 aa7.77□□□□□ -1.16
CSMD1-216ENST00000602557 FAHP16930 419 aa7.77□□□□□ -1.16
CSMD1-216ENST00000602557 GNB2P62879 340 aa7.77□□□□□ -1.16
CSMD1-216ENST00000602557 INSM1Q01101 510 aaPredicted RBP7.77□□□□□ -1.16
CSMD1-216ENST00000602557 SLC35E4Q6ICL7 350 aa7.77□□□□□ -1.16
CSMD1-216ENST00000602557 SCGB1D4Q6XE38 83 aa7.77□□□□□ -1.16
CSMD1-216ENST00000602557 RNF165Q6ZSG1 346 aa7.77□□□□□ -1.16
CSMD1-216ENST00000602557 ZNF707Q96C28 371 aaPredicted RBP7.77□□□□□ -1.16
CSMD1-216ENST00000602557 UQCR10Q9UDW1 63 aa7.77□□□□□ -1.16
CSMD1-216ENST00000602557 ATP23Q9Y6H3 246 aa7.77□□□□□ -1.16
CSMD1-216ENST00000602557 OR10AD1Q8NGE0 317 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 ALKBH3Q96Q83 286 aaPredicted RBP7.77□□□□□ -1.17
CSMD1-216ENST00000602557 IL20Q9NYY1 176 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 ETHE1O95571 254 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 ARIH2OSQ8N7S6 290 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 RNF2Q99496 336 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 FOXQ1Q9C009 403 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 MTFP1Q9UDX5 166 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 MBPP02686 304 aaPredicted RBP7.77□□□□□ -1.17
CSMD1-216ENST00000602557 ST6GAL1P15907 406 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 CCL4L1Q8NHW4 92 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 POLDIP2Q9Y2S7 368 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 FPR2P25090 351 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 CCR2P41597 374 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 BSXQ3C1V8 233 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 DCAF12L2Q5VW00 463 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 OR1L3Q8NH93 324 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 NRIP2Q9BQI9 281 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 A0A1B0GTL3 188 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 NMUP48645 174 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 ST8SIA1Q92185 356 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 ALG14Q96F25 216 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 NDFIP1Q9BT67 221 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 LSM2Q9Y333 95 aaKnown RBP7.77□□□□□ -1.17
CSMD1-216ENST00000602557 ZNF253O75346 499 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 HMGA1P17096 107 aaKnown RBP7.77□□□□□ -1.17
CSMD1-216ENST00000602557 SPCS3P61009 180 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 PPP2CBP62714 309 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 PPP2CAP67775 309 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 C20orf196Q8IYI0 205 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 WBP2Q969T9 261 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 MFRPQ9BY79 579 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 C11orf94C9JXX5 98 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 SPRY1O43609 319 aaPredicted RBP7.77□□□□□ -1.17
CSMD1-216ENST00000602557 VAMP5O95183 116 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 SFT2D2O95562 160 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 PRSS54Q6PEW0 395 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 OR10G8Q8NGN5 311 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 OR1N1Q8NGS0 311 aa7.77□□□□□ -1.17
CSMD1-216ENST00000602557 BAHD1Q8TBE0 780 aaPredicted RBP7.77□□□□□ -1.17
CSMD1-216ENST00000602557 LINC01553A4QN01 128 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 ARRDC5A6NEK1 342 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 TMEM210A6NLX4 147 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 PRRT4C9JH25 899 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 NDUFS6O75380 124 aaKnown RBP7.76□□□□□ -1.17
CSMD1-216ENST00000602557 SPNS3Q6ZMD2 512 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 RSG1Q9BU20 258 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 ASPDHA6ND91 283 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 DPTQ07507 201 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 HFEQ30201 348 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 OR4A4PQ8NGN8 299 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 S1PR5Q9H228 398 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 HSPB8Q9UJY1 196 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 THADAQ6YHU6 1953 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 GCGP01275 180 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 BSGP35613 385 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 DOK5Q9P104 306 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 ZDHHC8Q9ULC8 765 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 UPK1AO00322 258 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 NMBP08949 121 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 ZNF79Q15937 498 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 OXGR1Q96P68 337 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 ZNF576Q9H609 170 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 AP5S1Q9NUS5 200 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 ERHP84090 104 aaKnown RBP7.76□□□□□ -1.17
CSMD1-216ENST00000602557 TSPO2Q5TGU0 170 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 OR2W5A6NFC9 320 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 A6NNC1 897 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 WDR25Q64LD2 544 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-216ENST00000602557 LSRQ86X29 649 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-216ENST00000602557 EIF4E3Q8N5X7 224 aaKnown RBP7.76□□□□□ -1.17
CSMD1-216ENST00000602557 SPPL3Q8TCT6 385 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 TEX101Q9BY14 249 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 ARID2Q68CP9 1835 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 LOC107984156A0A0G2JMH3 177 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 GNG7O60262 68 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 CDAP32320 146 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 ID4P47928 161 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 TCTN3Q6NUS6 607 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 FDX2Q6P4F2 183 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 ARL17AQ8IVW1 177 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 ARHGAP5-AS1Q96IT6 56 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 METTL1Q9UBP6 276 aaKnown RBP7.76□□□□□ -1.17
CSMD1-216ENST00000602557 SOX21Q9Y651 276 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-216ENST00000602557 PRSS1P07477 247 aa7.76□□□□□ -1.17
CSMD1-216ENST00000602557 SNRPCP09234 159 aaKnown RBP7.76□□□□□ -1.17
CSMD1-216ENST00000602557 FKBP2P26885 142 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms