RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 LHX2P50458 406 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 HIST1H3AP68431 136 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 CEACAM16Q2WEN9 425 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 HIST2H3PS2Q5TEC6 136 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 ZNF774Q6NX45 483 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 UBAC2Q8NBM4 344 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 OR14K1Q8NGZ2 314 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 OR8U1Q8NH10 309 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 FER1L6-AS2Q96M78 137 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 SPACA1Q9HBV2 294 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 TMEM38BQ9NVV0 291 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 DOK5Q9P104 306 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 ZNF407Q9C0G0 2248 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 CXorf65A6NEN9 183 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 MKRN2OSH3BPM6 223 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 CYTIPO60759 359 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 BPNT1O95861 308 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 ARG1P05089 322 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 SNCAP37840 140 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 NDUFA6P56556 154 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 RSU1Q15404 277 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 TMEM268Q5VZI3 342 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 GLIPR1L1Q6UWM5 242 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 PIP4P1Q86T03 277 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 CD163Q86VB7 1156 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 TMEM251Q8N6I4 163 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 OR10D4PQ8NGN7 298 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 MAFIPQ8WZ33 124 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 SPTSSAQ969W0 71 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 PTX4Q96A99 478 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 GPER1Q99527 375 aa14.83□□□□□ -0.04
SHKBP1-205ENST00000594973 GAPDHP04406 335 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 CSN2P05814 226 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 HPNP05981 417 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 FAHP16930 419 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 RAB6AP20340 208 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 QRFPP83859 136 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 SNAI3Q3KNW1 292 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 CPT1CQ8TCG5 803 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 GALNT14Q96FL9 552 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 SCRT1Q9BWW7 348 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 MRPS28Q9Y2Q9 187 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 KMT2EQ8IZD2 1858 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 IGKV1-9A0A0C4DH69 117 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 WIPF3A6NGB9 483 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 RAB27BO00194 218 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 TSPAN15O95858 294 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 FTH1P19P0C7X4 201 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 AKR1C4P17516 323 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 OTX1P32242 354 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 RPL7L1Q6DKI1 246 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 ADAD2Q8NCV1 583 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 OR5D18Q8NGL1 313 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 FOXB1Q99853 325 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 OR5AC2Q9NZP5 309 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 FRYQ5TBA9 3013 aa14.82□□□□□ -0.04
SHKBP1-205ENST00000594973 ZNF318Q5VUA4 2279 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 DNAJC13O75165 2243 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 A0A1W2PPE2 198 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 ZNF32P17041 273 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 TBPP20226 339 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 CLDN18P56856 261 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 GAMTQ14353 236 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 GUK1Q16774 197 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 ACTBL2Q562R1 376 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 RTN4RL2Q86UN3 420 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 TMEM104Q8NE00 496 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 NICN1Q9BSH3 213 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 GPR35Q9HC97 309 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 PIGLQ9Y2B2 252 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 ZNF292O60281 2723 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 UMAD1C9J7I0 102 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 H7C1Q1 480 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 OR2C1O95371 312 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 SP1P08047 785 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 RPS10P46783 165 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 MEOX1P50221 254 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 PRSS12P56730 875 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 FAM3AP98173 230 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 C3AR1Q16581 482 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 VASH2Q86V25 355 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 OR4S1Q8NGB4 309 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 OR2AE1Q8NHA4 323 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 AQP3Q92482 292 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 MISP3Q96FF7 219 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 BANF2Q9H503 90 aa14.81□□□□□ -0.04
SHKBP1-205ENST00000594973 SPENQ96T58 3664 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 ZFHX2Q9C0A1 2572 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 A0A0U1RQV5 110 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 A0A1W2PP11 408 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 MRPL33O75394 65 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 DHRS3O75911 302 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 MPIG6BO95866 241 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 CST2P09228 141 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 GNB3P16520 340 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 RAB35Q15286 201 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 SURF2Q15527 256 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 C9orf135Q5VTT2 229 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 SLC16A14Q7RTX9 510 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 ARL6IP6Q8N6S5 226 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms