RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 GABRR1P24046 479 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 NPY4RP50391 375 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 SPCS2Q15005 226 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 TAF9Q16594 264 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 WDR25Q64LD2 544 aaPredicted RBP12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 Q6P435 159 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 LINC00596Q86U02 117 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 FGFRL1Q8N441 504 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 ST8SIA4Q92187 359 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 SLC25A46Q96AG3 418 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 TMUB1Q9BVT8 246 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 TMEM59Q9BXS4 323 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 LPAR2Q9HBW0 351 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 SLC25A10Q9UBX3 287 aaPredicted RBP12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 VPS13CQ709C8 3753 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 CCDC168Q8NDH2 2452 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 TEX15Q9BXT5 2789 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 H3BMQ9 156 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 LDLRAD4O15165 306 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 FCN3O75636 299 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 OR7C1O76099 320 aaPredicted RBP12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 INHBBP09529 407 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 SNRPBP14678 240 aaKnown RBP12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 NDUFB7P17568 137 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 GZMKP49863 264 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 RPS27AP62979 156 aaKnown RBP12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 LCN2P80188 198 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 MPV17LQ2QL34 196 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 METAP1DQ6UB28 335 aaPredicted RBP12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 LINC01356Q8N9X3 169 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 CHST4Q8NCG5 386 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 C1orf159Q96HA4 380 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 Q96M66 194 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 RBM38Q9H0Z9 239 aaKnown RBP12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 ZNF581Q9P0T4 197 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 FBLN5Q9UBX5 448 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 OR5V1Q9UGF6 321 aa12.85□□□□□ -0.35
RPRD1A-208ENST00000589050 TMEM82A0PJX8 343 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 KIAA1324LA8MWY0 1029 aaPredicted RBP12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 A8MXK9 166 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 B4DSR2 109 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 K7N7A8 449 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 SLC33A1O00400 549 aaPredicted RBP12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 PSPNO60542 156 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 ZNF737O75373 536 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 FOXH1O75593 365 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 PAHP00439 452 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 TK1P04183 234 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 ZFP36P26651 326 aaKnown RBP12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 PLA2G7Q13093 441 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 ATAD3CQ5T2N8 411 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 CYB5R2Q6BCY4 276 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 C17orf107Q6ZR85 190 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 LGALS14Q8TCE9 139 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 MSI2Q96DH6 328 aaKnown RBP12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 SNX22Q96L94 193 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 URM1Q9BTM9 101 aaKnown RBP12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 BARHL1Q9BZE3 327 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 CHST6Q9GZX3 395 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 FAM234AQ9H0X4 552 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 IFT22Q9H7X7 185 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 RSL24D1Q9UHA3 163 aaKnown RBP12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 RAB22AQ9UL26 194 aa12.84□□□□□ -0.35
RPRD1A-208ENST00000589050 TRAV24A0A0B4J272 114 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 DPPA5A6NC42 116 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A10PA6NDY2 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A18PA6NE21 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A16PA6NEW6 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A20PA6NIJ5 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A8PA6NJQ4 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A7PA6NKC0 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A22PA8MWA6 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A12PA8MX19 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A5PA8MXJ8 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A23PA8MXZ1 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 HSPB6O14558 160 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 TMEM127O75204 238 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 MSMBP08118 114 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A15PP0C7V4 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A13PP0C7W8 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A14PP0C7W9 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 FAM90A24PP0C7X0 464 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 ZNF16P17020 682 aaPredicted RBP12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 LMO1P25800 156 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 OR3A1P47881 315 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 RORCP51449 518 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 EFNB2P52799 333 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 GRK1Q15835 563 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 PAN3Q58A45 887 aaKnown RBP12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 LCE2DQ5TA82 110 aaPredicted RBP12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 OR8H2Q8N162 312 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 OR4S1Q8NGB4 309 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 PPP1R35Q8TAP8 253 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 H1FXQ92522 213 aaKnown RBP12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 NICN1Q9BSH3 213 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 MRI1Q9BV20 369 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 TM2D1Q9BX74 207 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 SHARPINQ9H0F6 387 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 LPAR5Q9H1C0 372 aa12.83□□□□□ -0.36
RPRD1A-208ENST00000589050 LOC105371242A0A075B767 164 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms