RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 OR4X2Q8NGF9 303 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 STMN2Q93045 179 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 UTP4Q969X6 686 aaKnown RBP12.37□□□□□ -0.43
NME3-211ENST00000568561 ADAT3Q96EY9 351 aaPredicted RBP12.37□□□□□ -0.43
NME3-211ENST00000568561 ADI1Q9BV57 179 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 ZNF286AQ9HBT8 521 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 DPM3Q9P2X0 92 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 POMPQ9Y244 141 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 OR2F2O95006 317 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 SERPINA3P01011 423 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 BRS3P32247 399 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 GLIPR1P48060 266 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 RBP2P50120 134 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 ATP1B3P54709 279 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 BDH1Q02338 343 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 AESQ08117 197 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 TP53I3Q53FA7 332 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 C16orf82Q7Z2V1 217 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 Q8IYB0 196 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 ENTHD1Q8IYW4 607 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 RCC1LQ96I51 464 aaKnown RBP12.36□□□□□ -0.43
NME3-211ENST00000568561 AKR1E2Q96JD6 320 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 GAL3ST2Q9H3Q3 398 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 GNG8Q9UK08 70 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 GSTK1Q9Y2Q3 226 aa12.36□□□□□ -0.43
NME3-211ENST00000568561 UBE2J1Q9Y385 318 aaPredicted RBP12.36□□□□□ -0.43
NME3-211ENST00000568561 TRGV10A0A0A0MS01 117 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 IGKV1-12A0A0C4DH73 117 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 H3BUI4 141 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 GYG2O15488 501 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 OR2H2O95918 312 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 IGKV1D-12P01611 117 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 IGLV1-47P01700 117 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 VSIG8P0DPA2 414 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 MTCP1P56278 107 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 RBM39Q14498 530 aaKnown RBP12.35□□□□□ -0.43
NME3-211ENST00000568561 ZNF146Q15072 292 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 SPIN3Q5JUX0 258 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 HEPN1Q6WQI6 88 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 OR5D18Q8NGL1 313 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 RNF166Q96A37 237 aaPredicted RBP12.35□□□□□ -0.43
NME3-211ENST00000568561 RBM14Q96PK6 669 aaKnown RBP12.35□□□□□ -0.43
NME3-211ENST00000568561 SPACA5Q96QH8 159 aa12.35□□□□□ -0.43
NME3-211ENST00000568561 EXOSC4Q9NPD3 245 aaKnown RBP12.35□□□□□ -0.43
NME3-211ENST00000568561 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.35□□□□□ -0.43
NME3-211ENST00000568561 WARS2Q9UGM6 360 aaKnown RBP12.35□□□□□ -0.43
NME3-211ENST00000568561 LEUTXA8MZ59 168 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 EBAG9O00559 213 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 CYB5AP00167 134 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 OR2T7P0C7T2 308 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 UBCP0CG48 685 aaKnown RBP12.34□□□□□ -0.43
NME3-211ENST00000568561 ERP29P30040 261 aaKnown RBP12.34□□□□□ -0.43
NME3-211ENST00000568561 POLR2IP36954 125 aaKnown RBP12.34□□□□□ -0.43
NME3-211ENST00000568561 OR3A4PP47883 348 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 ZNF85Q03923 595 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 SCN1BQ07699 218 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 ATXN7L3Q14CW9 347 aaPredicted RBP12.34□□□□□ -0.43
NME3-211ENST00000568561 HLA-DRB5Q30154 266 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 TPTE2P1Q5T6R2 138 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 KDM4DQ6B0I6 523 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 ETV3LQ6ZN32 361 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 LINC00482Q8N8I6 264 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 DNAAF1Q8NEP3 725 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 ZNF596Q8TC21 504 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 PP6455Q8WZ26 134 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 FGGYQ96C11 551 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 ZNF649Q9BS31 505 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 SEBOXQ9HB31 216 aaPredicted RBP12.34□□□□□ -0.43
NME3-211ENST00000568561 HMG20AQ9NP66 347 aa12.34□□□□□ -0.43
NME3-211ENST00000568561 G3V2T6 193 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 SULT1C4O75897 302 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 CCDC159P0C7I6 412 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 ZNF20P17024 532 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 ATF1P18846 271 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 HTR1FP30939 366 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 ATP6V1E1P36543 226 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 PDZK1IP1Q13113 114 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 DNAL1Q4LDG9 190 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 OR52W1Q6IF63 320 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 C18orf65Q6ZTR6 163 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 FAM220AQ7Z4H9 259 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 ZNF329Q86UD4 541 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 RTN4RL2Q86UN3 420 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 MRPL41Q8IXM3 137 aaKnown RBP12.33□□□□□ -0.44
NME3-211ENST00000568561 OR10AC1Q8NH08 325 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 COQ2Q96H96 371 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 OPALINQ96PE5 141 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 CIB1Q99828 191 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 PPIL3Q9H2H8 161 aaKnown RBP12.33□□□□□ -0.44
NME3-211ENST00000568561 GLS2Q9UI32 602 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 HHLA2Q9UM44 414 aa12.33□□□□□ -0.44
NME3-211ENST00000568561 ODAMA1E959 279 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 BUB1B-PAK6H3BSN5 160 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 TOR1AO14656 332 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 SH2D1BO14796 132 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 CLIC3O95833 236 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 IGHV3-7P01780 117 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 ZNF44P15621 663 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 NFYBP25208 207 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 CD34P28906 385 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms