RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 WDR1O75083 606 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 CGAP01215 116 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 IGKV3-15P01624 115 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 CBR1P16152 277 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 PMELP40967 661 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 UCP2P55851 309 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 FGL1Q08830 312 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 IKZF1Q13422 519 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 ZNF573Q86YE8 665 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 OR1J1Q8NGS3 322 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 TOMM40LQ969M1 308 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 POM121Q96HA1 1249 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 MAB21L2Q9Y586 359 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 CTSDP07339 412 aaPredicted RBP16.31■□□□□ 0.2
SMPD3-203ENST00000563226 SLC25A4P12235 298 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 MPV17P39210 176 aa16.31■□□□□ 0.2
SMPD3-203ENST00000563226 PLEKHN1Q494U1 663 aaPredicted RBP16.31■□□□□ 0.2
SMPD3-203ENST00000563226 CHMP1AQ9HD42 196 aaPredicted RBP16.31■□□□□ 0.2
SMPD3-203ENST00000563226 A0A0B4J2A0 478 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 MBD3L4A6NDZ8 208 aaPredicted RBP16.3■□□□□ 0.2
SMPD3-203ENST00000563226 MBD3L3A6NE82 208 aaPredicted RBP16.3■□□□□ 0.2
SMPD3-203ENST00000563226 MBD3L5A6NJ08 208 aaPredicted RBP16.3■□□□□ 0.2
SMPD3-203ENST00000563226 RP2O75695 350 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 SNAPC5O75971 98 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 HOXC12P31275 282 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 FCGR2CP31995 323 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 ECI1P42126 302 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 FXYD4P59646 89 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 IL24Q13007 206 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 PSG7Q13046 419 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 MPV17LQ2QL34 196 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 TMEM65Q6PI78 240 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 GSG1LQ6UXU4 331 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 C1orf162Q8NEQ5 155 aaPredicted RBP16.3■□□□□ 0.2
SMPD3-203ENST00000563226 MBD3L2Q8NHZ7 208 aaPredicted RBP16.3■□□□□ 0.2
SMPD3-203ENST00000563226 COQ8AQ8NI60 647 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 CITED4Q96RK1 184 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 SHPKQ9UHJ6 478 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 TNFSF18Q9UNG2 199 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 PROCRQ9UNN8 238 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 DMXL2Q8TDJ6 3036 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 ATMQ13315 3056 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 IGHV3-64DA0A0J9YX35 117 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 CRHP06850 196 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 IGSF11Q5DX21 431 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 BOD1Q96IK1 185 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 RAB18Q9NP72 206 aa16.3■□□□□ 0.2
SMPD3-203ENST00000563226 ANKRD11Q6UB99 2663 aaPredicted RBP16.29■□□□□ 0.2
SMPD3-203ENST00000563226 RNF222A6NCQ9 220 aa16.29■□□□□ 0.2
SMPD3-203ENST00000563226 PROB1E7EW31 1015 aa16.29■□□□□ 0.2
SMPD3-203ENST00000563226 KCNAB3O43448 404 aa16.29■□□□□ 0.2
SMPD3-203ENST00000563226 NAPSAO96009 420 aa16.29■□□□□ 0.2
SMPD3-203ENST00000563226 HOXB1P14653 301 aaPredicted RBP16.29■□□□□ 0.2
SMPD3-203ENST00000563226 FOXC1Q12948 553 aa16.29■□□□□ 0.2
SMPD3-203ENST00000563226 FAM219AQ8IW50 185 aa16.29■□□□□ 0.2
SMPD3-203ENST00000563226 OR10C1Q96KK4 312 aa16.29■□□□□ 0.2
SMPD3-203ENST00000563226 PKIBQ9C010 78 aa16.29■□□□□ 0.2
SMPD3-203ENST00000563226 ZNF71Q9NQZ8 489 aaPredicted RBP16.29■□□□□ 0.2
SMPD3-203ENST00000563226 MBD2Q9UBB5 411 aa16.29■□□□□ 0.2
SMPD3-203ENST00000563226 FAM215AQ9Y5M1 114 aa16.29■□□□□ 0.2
SMPD3-203ENST00000563226 CRYM-AS1A6NIL9 109 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 H0YL77 283 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 J3QT63 122 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 CECR9P0C854 216 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 ZNF728P0DKX0 622 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 BEX5Q5H9J7 111 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 FAM58AQ8N1B3 248 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 ADAT1Q9BUB4 502 aaKnown RBP16.28■□□□□ 0.2
SMPD3-203ENST00000563226 RTL8AQ9BWD3 113 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 IFNA2P01563 188 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 RAC2P15153 192 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 CLLU1Q5K131 121 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 ALKAL2Q6UX46 152 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 SUMF2Q8NBJ7 301 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 KLF14Q8TD94 323 aaPredicted RBP16.28■□□□□ 0.2
SMPD3-203ENST00000563226 NMES1Q9C002 83 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 Q9N2K0 584 aa16.28■□□□□ 0.2
SMPD3-203ENST00000563226 APC2O95996 2303 aa16.27■□□□□ 0.2
SMPD3-203ENST00000563226 TRAV24A0A0B4J272 114 aa16.27■□□□□ 0.2
SMPD3-203ENST00000563226 LINC00862A6NCI5 91 aa16.27■□□□□ 0.2
SMPD3-203ENST00000563226 IQCF6A8MYZ5 107 aa16.27■□□□□ 0.2
SMPD3-203ENST00000563226 LEUTXA8MZ59 168 aa16.27■□□□□ 0.2
SMPD3-203ENST00000563226 HOXB5P09067 269 aa16.27■□□□□ 0.2
SMPD3-203ENST00000563226 SELEP16581 610 aa16.27■□□□□ 0.2
SMPD3-203ENST00000563226 AADACP22760 399 aa16.27■□□□□ 0.2
SMPD3-203ENST00000563226 PIGPP57054 158 aa16.27■□□□□ 0.2
SMPD3-203ENST00000563226 SCCPDHQ8NBX0 429 aa16.27■□□□□ 0.2
SMPD3-203ENST00000563226 NEK7Q8TDX7 302 aa16.27■□□□□ 0.2
SMPD3-203ENST00000563226 HS3ST1O14792 307 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 PSMB6P28072 239 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 FAM76BQ5HYJ3 339 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 RDH5Q92781 318 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 MOB3AQ96BX8 217 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 VRK1Q99986 396 aaPredicted RBP16.26■□□□□ 0.19
SMPD3-203ENST00000563226 METTL8Q9H825 291 aaKnown RBP16.26■□□□□ 0.19
SMPD3-203ENST00000563226 TEX13DA0A0J9YY54 714 aaPredicted RBP16.26■□□□□ 0.19
SMPD3-203ENST00000563226 LRP5LA4QPB2 252 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 PRSS44E7EML9 344 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 H0YIZ8 118 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 SCTP09683 121 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms