RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 PCDHGB5Q9Y5G0 923 aa13.1□□□□□ -0.31
DDX55-212ENST00000544738 EPPK1P58107 5090 aaKnown RBP13.1□□□□□ -0.31
DDX55-212ENST00000544738 ODF3BA8MYP8 253 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 IGHA1P01876 353 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 PRKACAP17612 351 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 BCL3P20749 454 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 ERP29P30040 261 aaKnown RBP13.09□□□□□ -0.31
DDX55-212ENST00000544738 NPBWR2P48146 333 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 EFNB2P52799 333 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 MRPL28Q13084 256 aaKnown RBP13.09□□□□□ -0.31
DDX55-212ENST00000544738 ALKBH1Q13686 389 aaKnown RBP13.09□□□□□ -0.31
DDX55-212ENST00000544738 FOXB2Q5VYV0 432 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 OR52N4Q8NGI2 321 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 RPS4Y2Q8TD47 263 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 LGALS12Q96DT0 336 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 HMG20AQ9NP66 347 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 ABCB10Q9NRK6 738 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 INPP5EQ9NRR6 644 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 PITPNC1Q9UKF7 332 aa13.09□□□□□ -0.31
DDX55-212ENST00000544738 FUOMA2VDF0 154 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 OR4C45A6NMZ5 311 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 PSPNO60542 156 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 DBTP11182 482 aaKnown RBP13.08□□□□□ -0.32
DDX55-212ENST00000544738 GABRB1P18505 474 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 PAX6P26367 422 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 DUSP1P28562 367 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 RAB40BQ12829 278 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 DYNC1I2Q13409 638 aaKnown RBP13.08□□□□□ -0.32
DDX55-212ENST00000544738 NSUN5P1Q3KNT7 163 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 MINOS1Q5TGZ0 78 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 ZBTB49Q6ZSB9 765 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 LHFPL3Q86UP9 236 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 SAXO1Q8IYX7 474 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 OR5D14Q8NGL3 314 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 OR13C9Q8NGT0 318 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 RHOXF1Q8NHV9 184 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 HAVCR2Q8TDQ0 301 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 ALG8Q9BVK2 526 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 CHST6Q9GZX3 395 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 IL36RNQ9UBH0 155 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 UBE2J1Q9Y385 318 aaPredicted RBP13.08□□□□□ -0.32
DDX55-212ENST00000544738 SESN1Q9Y6P5 492 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 MINOS1-NBL1R4GNA1 71 aa13.08□□□□□ -0.32
DDX55-212ENST00000544738 MEX3AA1L020 520 aaKnown RBP13.07□□□□□ -0.32
DDX55-212ENST00000544738 H3BUI4 141 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 KDM4BO94953 1096 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 DYNLT3P51808 116 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 SSX2Q16385 188 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 TCF23Q7RTU1 214 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 SERPINA12Q8IW75 414 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 DYNAPQ8N1N2 210 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 TPRX1Q8N7U7 411 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 OR4S1Q8NGB4 309 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 OR51A4Q8NGJ6 313 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 OR10AC1Q8NH08 325 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 COMMD4Q9H0A8 199 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 TMEM133Q9H2Q1 129 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 ZCCHC4Q9H5U6 513 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 EXOSC4Q9NPD3 245 aaKnown RBP13.07□□□□□ -0.32
DDX55-212ENST00000544738 AASSQ9UDR5 926 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 TCF19Q9Y242 345 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 GSTK1Q9Y2Q3 226 aa13.07□□□□□ -0.32
DDX55-212ENST00000544738 DSCAML1Q8TD84 2053 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 LOC100130705A0A1B0GUX0 176 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 TMEM212A6NML5 194 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 K7EIL1 84 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 CHST1O43916 411 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 CCDC159P0C7I6 412 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 CALCBP10092 127 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 LMO1P25800 156 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 OR3A1P47881 315 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 SNU13P55769 128 aaKnown RBP13.06□□□□□ -0.32
DDX55-212ENST00000544738 P2RX3P56373 397 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 KLHL22Q53GT1 634 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 OR52W1Q6IF63 320 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 TRAPPC6BQ86SZ2 158 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 CHST4Q8NCG5 386 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 OR5AK2Q8NH90 309 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 RFT1Q96AA3 541 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 NKX3-1Q99801 234 aaPredicted RBP13.06□□□□□ -0.32
DDX55-212ENST00000544738 SLC29A1Q99808 456 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 CLEC7AQ9BXN2 247 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 GAL3ST2Q9H3Q3 398 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 S100A14Q9HCY8 104 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 ERVK13-1Q9NX77 482 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 MYRFQ9Y2G1 1151 aa13.06□□□□□ -0.32
DDX55-212ENST00000544738 RPL36Q9Y3U8 105 aaKnown RBP13.06□□□□□ -0.32
DDX55-212ENST00000544738 TRGV10A0A0A0MS01 117 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 IGHV2-26A0A0B4J1V2 119 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 IGKV1-12A0A0C4DH73 117 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 SIRPB1O00241 398 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 ZFPL1O95159 310 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 OR2H2O95918 312 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 IGKV1D-12P01611 117 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 RAB13P51153 203 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 GBX2P52951 348 aaPredicted RBP13.05□□□□□ -0.32
DDX55-212ENST00000544738 PLA1AQ53H76 456 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 PQLC1Q8N2U9 271 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 PARP16Q8N5Y8 322 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 KLHDC1Q8N7A1 406 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms