RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 OR2J2O76002 312 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 CXorf1O96002 111 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 ST6GAL1P15907 406 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 OR8G2PQ6IF36 304 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 RBM45Q8IUH3 476 aaKnown RBP6.92□□□□□ -1.3
VPS13D-211ENST00000543710 WBP2Q969T9 261 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 OR2A5Q96R48 311 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 OR4C12Q96R67 309 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 GPX7Q96SL4 187 aaPredicted RBP6.92□□□□□ -1.3
VPS13D-211ENST00000543710 HSD17B10Q99714 261 aaKnown RBP6.92□□□□□ -1.3
VPS13D-211ENST00000543710 PDCD1LG2Q9BQ51 273 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 C19orf24Q9BVV8 132 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 PARD6AQ9NPB6 346 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 C1RLQ9NZP8 487 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 VAX2Q9UIW0 290 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 WDR90Q96KV7 1748 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 POM121BA6NF01 834 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 CDRT15L2A8MXV6 281 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 ZNF737O75373 536 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 WISP3O95389 354 aaPredicted RBP6.92□□□□□ -1.3
VPS13D-211ENST00000543710 MPC2O95563 127 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 EPPINO95925 133 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 ETFDHQ16134 617 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 CCSMST1Q4G0I0 132 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 SP5Q6BEB4 398 aaPredicted RBP6.92□□□□□ -1.3
VPS13D-211ENST00000543710 DNASE2BQ8WZ79 361 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 SEBOXQ9HB31 216 aaPredicted RBP6.92□□□□□ -1.3
VPS13D-211ENST00000543710 ONECUT1Q9UBC0 465 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 A0A1W2PNV4 684 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 hADV38S2A0JD32 116 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 RBFOX3A6NFN3 312 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 PYCARD-AS1I3L0S3 204 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 NKX2-8O15522 239 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 ERVS71-1P61550 626 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 B4GALNT1Q00973 533 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 FFAR4Q5NUL3 377 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 C20orf204Q6ZNR8 217 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 SLC26A1Q9H2B4 701 aa6.92□□□□□ -1.3
VPS13D-211ENST00000543710 MRPL22Q9NWU5 206 aaKnown RBP6.92□□□□□ -1.3
VPS13D-211ENST00000543710 TRAV9-1A0A075B6T8 112 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 HS3ST1O14792 307 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 KCNAB3O43448 404 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 SLC2A10O95528 541 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 MT-ND6P03923 174 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 PGA4P0DJD7 388 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 PGA5P0DJD9 388 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 GPM6AP51674 278 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 RELBQ01201 579 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 TESK1Q15569 626 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 KIRREL2Q6UWL6 708 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 GNB4Q9HAV0 340 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 LANCL2Q9NS86 450 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 TRBV23-1A0A0A0MS06 115 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 ZNF320A2RRD8 509 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 CBY3A6NI87 242 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 RPL36A-HNRNPH2H7BZ11 118 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 SIRPB1O00241 398 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 GOSR1O95249 250 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 SRD5A1P18405 259 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 RPS4Y1P22090 263 aaKnown RBP6.91□□□□□ -1.3
VPS13D-211ENST00000543710 EPHA2P29317 976 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 CDC34P49427 236 aaPredicted RBP6.91□□□□□ -1.3
VPS13D-211ENST00000543710 RPS20P60866 119 aaKnown RBP6.91□□□□□ -1.3
VPS13D-211ENST00000543710 VAX1Q5SQQ9 334 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 OR52L2PQ8NGH6 319 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 MACROD1Q9BQ69 325 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 NEURL2Q9BR09 285 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 BANF2Q9H503 90 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 ZNF768Q9H5H4 540 aaKnown RBP6.91□□□□□ -1.3
VPS13D-211ENST00000543710 IL21Q9HBE4 155 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 TNFRSF19Q9NS68 423 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 RNF115Q9Y4L5 304 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 ARID2Q68CP9 1835 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 PRKRAO75569 313 aaKnown RBP6.91□□□□□ -1.3
VPS13D-211ENST00000543710 FOXH1O75593 365 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 F2RP25116 425 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 DRD3P35462 400 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 MEOX2P50222 304 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 WDR38Q5JTN6 314 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 TEX30Q5JUR7 227 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 PRSS36Q5K4E3 855 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 ZNF770Q6IQ21 691 aaPredicted RBP6.91□□□□□ -1.3
VPS13D-211ENST00000543710 BHLHA15Q7RTS1 189 aaPredicted RBP6.91□□□□□ -1.3
VPS13D-211ENST00000543710 OR8D4Q8NGM9 314 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 WFDC5Q8TCV5 224 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 PTP4A1Q93096 173 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 EID2BQ96D98 161 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 ABHD17AQ96GS6 310 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 FSCN3Q9NQT6 498 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 BET1LQ9NYM9 111 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 XIRP1Q702N8 1843 aaKnown RBP6.91□□□□□ -1.3
VPS13D-211ENST00000543710 TRIOBPQ9H2D6 2365 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 LEUTXA8MZ59 168 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 PROB1E7EW31 1015 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 PHOX2AO14813 284 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 CD80P33681 288 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 EDDM3BP56851 147 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 FAM3BP58499 235 aaPredicted RBP6.91□□□□□ -1.3
VPS13D-211ENST00000543710 DEFB121Q5J5C9 76 aa6.91□□□□□ -1.3
VPS13D-211ENST00000543710 SPANXN5Q5MJ07 72 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms