RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 SERPINA2P20848 420 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 MAP2K4P45985 399 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 UBA52P62987 128 aaKnown RBP9.07□□□□□ -0.96
DDB1-222ENST00000543627 DOC2BQ14184 412 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 ZNF273Q14593 569 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 INSL4Q14641 139 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 SPHARQ15513 63 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 ASPHD2Q6ICH7 369 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 C12orf54Q6X4T0 127 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 ZNF485Q8NCK3 441 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 C8orf46Q8TAG6 207 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 TAF15Q92804 592 aaKnown RBP eCLIP9.07□□□□□ -0.96
DDB1-222ENST00000543627 TMEM203Q969S6 136 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 PGLYRP3Q96LB9 341 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 ZNF184Q99676 751 aaPredicted RBP9.07□□□□□ -0.96
DDB1-222ENST00000543627 FAM234AQ9H0X4 552 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 METTL9Q9H1A3 318 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 PPA2Q9H2U2 334 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 METTL8Q9H825 291 aaKnown RBP9.07□□□□□ -0.96
DDB1-222ENST00000543627 NOX4Q9NPH5 578 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 RRP15Q9Y3B9 282 aaKnown RBP9.07□□□□□ -0.96
DDB1-222ENST00000543627 TRAV8-7A0A075B6U6 113 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 TRBV5-5A0A0J9YX44 114 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 M0R1W7 72 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 NPFFO15130 113 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 PSPNO60542 156 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 ALX3O95076 343 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 PRTN3P24158 256 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 PTGFRP43088 359 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 LGALS4P56470 323 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 BPIFB3P59826 476 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 ZP1P60852 638 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 RPS11P62280 158 aaKnown RBP eCLIP9.06□□□□□ -0.96
DDB1-222ENST00000543627 SLC35A2P78381 396 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 GUCA2AQ02747 115 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 AESQ08117 197 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 DYNC1I2Q13409 638 aaKnown RBP9.06□□□□□ -0.96
DDB1-222ENST00000543627 SLC9A3R2Q15599 337 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 ACSM3Q53FZ2 586 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 SPIN3Q5JUX0 258 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 LIPKQ5VXJ0 399 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 C17orf107Q6ZR85 190 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 CEACAM19Q7Z692 300 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 SAXO1Q8IYX7 474 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 OR8H2Q8N162 312 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 KIR3DL3Q8N743 410 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 TBC1D15Q8TC07 691 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 RPS4Y2Q8TD47 263 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 UFD1Q92890 307 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 MUL1Q969V5 352 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 SLC25A28Q96A46 364 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 Q9H521 79 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 TCF7L1Q9HCS4 588 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 RAB26Q9ULW5 256 aa9.06□□□□□ -0.96
DDB1-222ENST00000543627 SF3B6Q9Y3B4 125 aaKnown RBP9.06□□□□□ -0.96
DDB1-222ENST00000543627 A0A0G2JK05 382 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 hADV38S2A0JD32 116 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 MAGEA13PA6NCF6 341 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 MGST3O14880 152 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 ZNF737O75373 536 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 ALDOBP05062 364 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 CRYBA1P05813 215 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 CRHBPP24387 322 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 PAX6P26367 422 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 OR3A1P47881 315 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 MTNR1BP49286 362 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 ATXN7L3Q14CW9 347 aaPredicted RBP9.05□□□□□ -0.96
DDB1-222ENST00000543627 ZNF146Q15072 292 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 PIGYQ3MUY2 71 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 SLC22A6Q4U2R8 563 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 PLA1AQ53H76 456 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 PAN3Q58A45 887 aaKnown RBP9.05□□□□□ -0.96
DDB1-222ENST00000543627 RBM48Q5RL73 367 aaKnown RBP9.05□□□□□ -0.96
DDB1-222ENST00000543627 ATAD3CQ5T2N8 411 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 NCR3LG1Q68D85 454 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 CRIP3Q6Q6R5 217 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 PIP4P2Q8N4L2 257 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 SPATA3Q8NHX4 192 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 FAM216AQ8WUB2 273 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 DERL3Q96Q80 235 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 CDCA4Q9BXL8 241 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 HEXA-AS1Q9H8Q6 139 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 BLOC1S6Q9UL45 172 aa9.05□□□□□ -0.96
DDB1-222ENST00000543627 COL6A5A8TX70 2615 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 HAX1O00165 279 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 OR7C1O76099 320 aaPredicted RBP9.04□□□□□ -0.96
DDB1-222ENST00000543627 ARG1P05089 322 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 MELTFP08582 738 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 ZNF728P0DKX0 622 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 IGFBP3P17936 291 aaPredicted RBP9.04□□□□□ -0.96
DDB1-222ENST00000543627 OMGP23515 440 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 MAPK3P27361 379 aaPredicted RBP9.04□□□□□ -0.96
DDB1-222ENST00000543627 SAA4P35542 130 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 GLIPR1P48060 266 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 BMXP51813 675 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 UBE2E1P51965 193 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 KRBOX4Q5JUW0 171 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 FAM27D1Q5T7N8 215 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 AWAT2Q6E213 333 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 ZNF529Q6P280 563 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms