RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 RTL6Q6ICC9 239 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 CLEC18BQ6UXF7 455 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.61□□□□□ -1.67
PROM1-220ENST00000540805 ATG4DQ86TL0 474 aaPredicted RBP4.61□□□□□ -1.67
PROM1-220ENST00000540805 THNSL2Q86YJ6 484 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 COMMD1Q8N668 190 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 OR56B1Q8NGI3 324 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 PIGTQ969N2 578 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 ANKRD9Q96BM1 317 aaPredicted RBP4.61□□□□□ -1.67
PROM1-220ENST00000540805 SDSLQ96GA7 329 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 SCGB3A2Q96PL1 93 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 ADAM19Q9H013 955 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 GAR1Q9NY12 217 aaKnown RBP4.61□□□□□ -1.67
PROM1-220ENST00000540805 HS3ST3B1Q9Y662 390 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 ATP23Q9Y6H3 246 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 TNRC6BQ9UPQ9 1833 aaKnown RBP4.61□□□□□ -1.67
PROM1-220ENST00000540805 WIPF3A6NGB9 483 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 ZNF587BE7ETH6 402 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 TRAPPC2LH3BP13 241 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 RAMP1O60894 148 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 IGLV3-19P01714 112 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 CXCL1P09341 107 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 OR13C7P0DN81 318 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 CD37P11049 281 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 GNB3P16520 340 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 LGALS4P56470 323 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 CLDN15P56746 228 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 ARF1P84077 181 aaKnown RBP4.61□□□□□ -1.67
PROM1-220ENST00000540805 FZD2Q14332 565 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 GUK1Q16774 197 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 WIPI1Q5MNZ9 446 aaPredicted RBP4.61□□□□□ -1.67
PROM1-220ENST00000540805 GPR157Q5UAW9 335 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 TMEM268Q5VZI3 342 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 NSUN5P2Q63ZY6 315 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 NPSR1Q6W5P4 371 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 CPEB3Q8NE35 698 aaKnown RBP4.61□□□□□ -1.67
PROM1-220ENST00000540805 OR5L1Q8NGL2 311 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 OR1J1Q8NGS3 322 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 TERB2Q8NHR7 220 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 RNASE8Q8TDE3 154 aaKnown RBP4.61□□□□□ -1.67
PROM1-220ENST00000540805 CD300LFQ8TDQ1 290 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 MAFIPQ8WZ33 124 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 TMEM230Q96A57 120 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 SPACA5Q96QH8 159 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 TMEM208Q9BTX3 173 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 LRP12Q9Y561 859 aa4.61□□□□□ -1.67
PROM1-220ENST00000540805 LAMA5O15230 3695 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 IGF2RP11717 2491 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 LOC102725191A0A1B0GVB3 256 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 FIGNL2A6NMB9 653 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 UMAD1C9J7I0 102 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 IGHV4-34P06331 123 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 HKR1P10072 659 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 CD33P20138 364 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 ARL3P36405 182 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 NPY4RP50391 375 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 RAB1AP62820 205 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 SLC35A1P78382 337 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 EXT1Q16394 746 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 BATFQ16520 125 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 ALKBH6Q3KRA9 238 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 MIDNQ504T8 468 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 NCR3LG1Q68D85 454 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 CLEC2AQ6UVW9 174 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 C1QL4Q86Z23 238 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 POC1AQ8NBT0 407 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 OR4C3Q8NH37 302 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 PSMF1Q92530 271 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 SARAFQ96BY9 339 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 PLPPR2Q96GM1 343 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 VSTM2LQ96N03 204 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 MESP1Q9BRJ9 268 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 SMIM3Q9BZL3 60 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 EIF5A2Q9GZV4 153 aaKnown RBP4.6□□□□□ -1.67
PROM1-220ENST00000540805 SLC26A1Q9H2B4 701 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 DECR2Q9NUI1 292 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 GPR132Q9UNW8 380 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 B9D1Q9UPM9 204 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 SLC5A6Q9Y289 635 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 TP53TG5Q9Y2B4 290 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 CBY1Q9Y3M2 126 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 CEP192Q8TEP8 1941 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 KIF26BQ2KJY2 2108 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 TLN2Q9Y4G6 2542 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 JTBO76095 146 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 NXPH2O95156 264 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 NSA2O95478 260 aaKnown RBP4.6□□□□□ -1.67
PROM1-220ENST00000540805 CRYAAP02489 173 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 GAPDHP04406 335 aaKnown RBP4.6□□□□□ -1.67
PROM1-220ENST00000540805 HOXB5P09067 269 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 HOXA5P20719 270 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 FPR2P25090 351 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 SNCAP37840 140 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 POLR2HP52434 150 aaKnown RBP4.6□□□□□ -1.67
PROM1-220ENST00000540805 ROM1Q03395 351 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 ZNF616Q08AN1 781 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 CLN3Q13286 438 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 ANKRD55Q3KP44 614 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 C1orf140Q5VVS0 124 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 BTNL3Q6UXE8 466 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms