RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 LYRM2Q9NU23 88 aaPredicted RBP15.3■□□□□ 0.04
RAB40C-205ENST00000539661 FOXD3Q9UJU5 478 aaPredicted RBP15.3■□□□□ 0.04
RAB40C-205ENST00000539661 MKRN2OSH3BPM6 223 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 DBHP09172 617 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 RRADP55042 308 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 PNRC1Q12796 327 aaPredicted RBP15.3■□□□□ 0.04
RAB40C-205ENST00000539661 PLPP5Q8NEB5 264 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 GJC3Q8NFK1 279 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 SPSB1Q96BD6 273 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 KLHDC7BQ96G42 594 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 MEGF10Q96KG7 1140 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 C2orf88Q9BSF0 95 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 TLX3O43711 291 aaPredicted RBP15.3■□□□□ 0.04
RAB40C-205ENST00000539661 CD63P08962 238 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 OPRM1P35372 400 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 NKX2-1P43699 371 aaPredicted RBP15.3■□□□□ 0.04
RAB40C-205ENST00000539661 CEBPGP53567 150 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 PLPPR5Q32ZL2 321 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 PRSS58Q8IYP2 241 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 FAM185AQ8N0U4 392 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 OR10AD1Q8NGE0 317 aa15.3■□□□□ 0.04
RAB40C-205ENST00000539661 LOC102725191A0A1B0GVB3 256 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 TRDCB7Z8K6 153 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 SHISA8B8ZZ34 492 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 MMP9P14780 707 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 FABP4P15090 132 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 BAXQ07812 192 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 ABHD5Q8WTS1 349 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 ZNF286AQ9HBT8 521 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 B3GALT1Q9Y5Z6 326 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 ASCL1P50553 236 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 AKR1C8PQ5T2L2 129 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 LANCL3Q6ZV70 420 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 TMEM252Q8N6L7 170 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 POC1BQ8TC44 478 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 FRZBQ92765 325 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 CYP8B1Q9UNU6 501 aa15.29■□□□□ 0.04
RAB40C-205ENST00000539661 TRAV1-1A0A0B4J248 108 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 MSR1P21757 451 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 LTBRP36941 435 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 CEACAM6P40199 344 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 GUCA1AP43080 201 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-205ENST00000539661 MTCP1P56278 107 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 ZNF124Q15973 351 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 DPPA2Q7Z7J5 298 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 TMEM171Q8WVE6 324 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 PACRGQ96M98 296 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-205ENST00000539661 PITPNC1Q9UKF7 332 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 IGLV3-32A0A0A0MS00 114 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 SMCO3A2RU48 225 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 OTX1P32242 354 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-205ENST00000539661 RAB4BP61018 213 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 RPL23AP62750 156 aaKnown RBP15.28■□□□□ 0.04
RAB40C-205ENST00000539661 OR8B8Q15620 311 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 TAF9Q16594 264 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 ZNF100Q8IYN0 542 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 OR1L3Q8NH93 324 aa15.28■□□□□ 0.04
RAB40C-205ENST00000539661 CDCA3Q99618 268 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-205ENST00000539661 C3orf85A0A1B0GTC6 90 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 F5H5K5 113 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 CLDN34H7C241 214 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 HERV-K104P61576 105 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 VAMP2P63027 116 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 PDZD11Q5EBL8 140 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 ASCL4Q6XD76 172 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 C16orf47Q6ZP98 133 aaPredicted RBP15.27■□□□□ 0.04
RAB40C-205ENST00000539661 DEFB119Q8N690 84 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 OR11L1Q8NGX0 322 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 TMEM56Q96MV1 263 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 TP53RKQ96S44 253 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 TMEM222Q9H0R3 208 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 SLC7A11Q9UPY5 501 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 TMEM56-RWDD3S4R434 201 aa15.27■□□□□ 0.04
RAB40C-205ENST00000539661 LOC102723971A0A1B0GUV8 181 aa15.27■□□□□ 0.03
RAB40C-205ENST00000539661 NKX2-6A6NCS4 301 aa15.27■□□□□ 0.03
RAB40C-205ENST00000539661 FOLR1P15328 257 aa15.27■□□□□ 0.03
RAB40C-205ENST00000539661 HIST1H3AP68431 136 aa15.27■□□□□ 0.03
RAB40C-205ENST00000539661 C17orf82Q86X59 251 aaPredicted RBP15.27■□□□□ 0.03
RAB40C-205ENST00000539661 CARFQ8N187 725 aa15.27■□□□□ 0.03
RAB40C-205ENST00000539661 OR5C1Q8NGR4 320 aa15.27■□□□□ 0.03
RAB40C-205ENST00000539661 DKKL1Q9UK85 242 aa15.27■□□□□ 0.03
RAB40C-205ENST00000539661 RFNGQ9Y644 331 aa15.27■□□□□ 0.03
RAB40C-205ENST00000539661 ABCA7Q8IZY2 2146 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 TRBV24-1A0A075B6N3 115 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 DVL1O14640 695 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 PHOX2AO14813 284 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 MPPED1O15442 326 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 CYB5R3P00387 301 aaPredicted RBP15.26■□□□□ 0.03
RAB40C-205ENST00000539661 PNLIPP16233 465 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 ARL4DP49703 201 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 NOVA1P51513 510 aaKnown RBP15.26■□□□□ 0.03
RAB40C-205ENST00000539661 SSX2Q16385 188 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 Q6ZS52 159 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 RNASEH2CQ8TDP1 164 aaKnown RBP15.26■□□□□ 0.03
RAB40C-205ENST00000539661 HIST1H2BLQ99880 126 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 KLRF1Q9NZS2 232 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 A0A1B0GX78 115 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 DUXBA0A1W2PPF3 345 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 PROB1E7EW31 1015 aa15.26■□□□□ 0.03
RAB40C-205ENST00000539661 TERTO14746 1132 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 480 ms