RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 MYOZ3Q8TDC0 251 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 DEFB104AQ8WTQ1 72 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 CASTOR1Q8WTX7 329 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 SLC35B4Q969S0 331 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 SPSB4Q96A44 273 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 NMD3Q96D46 503 aaKnown RBP2.85□□□□□ -1.95
YBX3-205ENST00000536107 COQ7Q99807 217 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 RARRES2Q99969 163 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 NDUFAF3Q9BU61 184 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 RTL8AQ9BWD3 113 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 HDHD2Q9H0R4 259 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 SP140LQ9H930 580 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 PCDHB16Q9NRJ7 776 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 LIN7CQ9NUP9 197 aaKnown RBP2.85□□□□□ -1.95
YBX3-205ENST00000536107 GIMAP2Q9UG22 337 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 OR14J1Q9UGF5 321 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 ZNF180Q9UJW8 692 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 ZNF222Q9UK12 451 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 COPS3Q9UNS2 423 aa2.85□□□□□ -1.95
YBX3-205ENST00000536107 A0A0B4J203 849 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 A0A0B4J2E0 115 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 A0A0G2JPF8 293 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 TEX13CA0A0J9YWL9 993 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 PRSS51A0A1B0GVH4 220 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 A0A1B0GX12 115 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 hADV38S2A0JD32 116 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 A6NIZ1 184 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 OOSP1A8MZH6 123 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 HNRNPCL2B2RXH8 293 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 HNRNPCL3B7ZW38 293 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 C5orf58C9J3I9 102 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 E7ESA3 106 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 G3V318 75 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 H3BQF6 201 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 BUB1B-PAK6H3BSN5 160 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 AZIN1O14977 448 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 MPZL2O60487 215 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 HNRNPCL1O60812 293 aaKnown RBP2.84□□□□□ -1.95
YBX3-205ENST00000536107 OXTP01178 125 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 IFNA5P01569 189 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 C1QCP02747 245 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 TK1P04183 234 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 VIMP08670 466 aaKnown RBP2.84□□□□□ -1.95
YBX3-205ENST00000536107 ACSM4P0C7M7 580 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 HNRNPCL4P0DMR1 293 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 FUT1P19526 365 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 ANOS1P23352 680 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 HLA-DMBP28068 263 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 RAP1BP61224 184 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 RAP1AP62834 184 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 TXNL4AP83876 142 aaKnown RBP2.84□□□□□ -1.95
YBX3-205ENST00000536107 LRRC74AQ0VAA2 488 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 UGT3A2Q3SY77 523 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 PIK3CD-AS1Q5SR53 167 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 GLYATL3Q5SZD4 288 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 PRAMEF5Q5TYX0 476 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 OR52W1Q6IF63 320 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 CORO6Q6QEF8 472 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 ZNF621Q6ZSS3 439 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 FOXL2NBQ6ZUU3 175 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 CYS1Q717R9 158 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 MOB3BQ86TA1 216 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 RTN4RL2Q86UN3 420 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 ZDHHC21Q8IVQ6 265 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 OR6V1Q8N148 313 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 ASCC1Q8N9N2 400 aaKnown RBP2.84□□□□□ -1.95
YBX3-205ENST00000536107 ZBTB34Q8NCN2 500 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 OR52B4Q8NGK2 314 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 OR2K2Q8NGT1 345 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 OR4A5Q8NH83 315 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 ZNF671Q8TAW3 534 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 TMEM163Q8TC26 289 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 SPTSSAQ969W0 71 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 PPP3R2Q96LZ3 170 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 HIST1H2AAQ96QV6 131 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 HSPB9Q9BQS6 159 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 RNF126Q9BV68 326 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 PAPOLGQ9BWT3 736 aaKnown RBP2.84□□□□□ -1.95
YBX3-205ENST00000536107 NSRP1Q9H0G5 558 aaKnown RBP2.84□□□□□ -1.95
YBX3-205ENST00000536107 RANGRFQ9HD47 186 aaPredicted RBP2.84□□□□□ -1.95
YBX3-205ENST00000536107 PARP11Q9NR21 331 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 MRM2Q9UI43 246 aaKnown RBP2.84□□□□□ -1.95
YBX3-205ENST00000536107 ATPIF1Q9UII2 106 aa2.84□□□□□ -1.95
YBX3-205ENST00000536107 ZNF107Q9UII5 783 aaPredicted RBP2.84□□□□□ -1.95
YBX3-205ENST00000536107 DEFB131BA0A096LNP1 70 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 TRAV41A0A0B4J266 112 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 IGKV3D-20A0A0C4DH25 116 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 LOC102723971A0A1B0GUV8 181 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 FAM90A18PA6NE21 464 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 FAM90A16PA6NEW6 464 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 FAM90A20PA6NIJ5 464 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 TMEM210A6NLX4 147 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 FAM90A9PA6NNJ1 464 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 FAM90A12PA8MX19 464 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 FAM90A5PA8MXJ8 464 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 K7N7A8 449 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 RAB27BO00194 218 aa2.83□□□□□ -1.96
YBX3-205ENST00000536107 PGRMC1O00264 195 aaKnown RBP2.83□□□□□ -1.96
YBX3-205ENST00000536107 XKRYO14609 159 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms