RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 KCTD21Q4G0X4 260 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 SLC22A6Q4U2R8 563 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 PAN3Q58A45 887 aaKnown RBP4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 ELP2Q6IA86 826 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF773Q6PK81 442 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 C1orf122Q6ZSJ8 110 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 VMO1Q7Z5L0 202 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 PHC2Q8IXK0 858 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 OSR2Q8N2R0 312 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 LY6G5BQ8NDX9 201 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR4M1Q8NGD0 313 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR10K1Q8NGX5 313 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 NEK7Q8TDX7 302 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 TMEM158Q8WZ71 300 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 LHX4Q969G2 390 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 MUL1Q969V5 352 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZDHHC16Q969W1 377 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 DACT3Q96B18 629 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 MRPS24Q96EL2 167 aaKnown RBP4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 SLC6A7Q99884 636 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 CHST6Q9GZX3 395 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 CST11Q9H112 138 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 PPA2Q9H2U2 334 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 GAL3ST2Q9H3Q3 398 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 HEXA-AS1Q9H8Q6 139 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZMAT3Q9HA38 289 aaKnown RBP4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 PLGRKTQ9HBL7 147 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 SPACA1Q9HBV2 294 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 C19orf12Q9NSK7 152 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 GHRLQ9UBU3 117 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 ST3GAL6Q9Y274 331 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM96BQ9Y3D0 163 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 LRRC42Q9Y546 428 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 MAB21L2Q9Y586 359 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 CELSR1Q9NYQ6 3014 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 AKAP9Q99996 3911 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 IGHV1-69DA0A0B4J2H0 117 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 RNF212BA8MTL3 300 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 TRIM77I1YAP6 450 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 CCRL2O00421 344 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 HSPB6O14558 160 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF737O75373 536 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 CRTAPO75718 401 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 CDRT1O95170 752 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 AVPP01185 164 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 FSHBP01225 129 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 IGHV1-69P01742 117 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 RBP4P02753 201 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 CSN2P05814 226 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 UCHL1P09936 223 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF728P0DKX0 622 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 IGHV4-38-2P0DP08 117 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 SRMP19623 302 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 GALP22466 123 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 CALRP27797 417 aaKnown RBP4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 ERP29P30040 261 aaKnown RBP4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR3A1P47881 315 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 KCNJ3P48549 501 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 P2RX3P56373 397 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 LGALS4P56470 323 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 RBM11P57052 281 aaKnown RBP4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 RPS25P62851 125 aaKnown RBP4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 EMX1Q04741 257 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 RBM39Q14498 530 aaKnown RBP4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 ATXN7L3Q14CW9 347 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 MPV17LQ2QL34 196 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 PIGYQ3MUY2 71 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 TIMM50Q3ZCQ8 353 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 NHLRC3Q5JS37 347 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 KRBOX4Q5JUW0 171 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 ATAD3CQ5T2N8 411 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 UBE2UQ5VVX9 321 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 TMEM200BQ69YZ2 307 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 ASPHD2Q6ICH7 369 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 METAP1DQ6UB28 335 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 GLIPR1L1Q6UWM5 242 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 BRD3OSQ6XYD6 125 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 C1orf229Q6ZS94 237 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 USP43Q70EL4 1123 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 PRIMA1Q86XR5 153 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 SPARTQ8N0X7 666 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 FGFRL1Q8N441 504 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR51T1Q8NGJ9 327 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR6M1Q8NGM8 313 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR13D1Q8NGV5 346 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 C22orf15Q8WYQ4 148 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 ORAI1Q96D31 301 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF714Q96N38 554 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 TBX15Q96SF7 602 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 BARHL1Q9BZE3 327 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 SIRPDQ9H106 197 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 RAB9BQ9NP90 201 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 SIRT7Q9NRC8 400 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 NDUFB11Q9NX14 153 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR6C3Q9NZP0 311 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 IL36RNQ9UBH0 155 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF69Q9UC07 566 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 SSR3Q9UNL2 185 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 UBE2J1Q9Y385 318 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 SF3B6Q9Y3B4 125 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms