RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 PLAC9Q5JTB6 97 aa12.7□□□□□ -0.38
SREK1-209ENST00000520953 BRICD5Q6PL45 260 aa12.7□□□□□ -0.38
SREK1-209ENST00000520953 ZSCAN4Q8NAM6 433 aaPredicted RBP12.7□□□□□ -0.38
SREK1-209ENST00000520953 OR51T1Q8NGJ9 327 aa12.7□□□□□ -0.38
SREK1-209ENST00000520953 PHF21AQ96BD5 680 aa12.7□□□□□ -0.38
SREK1-209ENST00000520953 Q96M66 194 aa12.7□□□□□ -0.38
SREK1-209ENST00000520953 TMEM246Q9BRR3 403 aa12.7□□□□□ -0.38
SREK1-209ENST00000520953 CST11Q9H112 138 aa12.7□□□□□ -0.38
SREK1-209ENST00000520953 NOP16Q9Y3C1 178 aaKnown RBP12.7□□□□□ -0.38
SREK1-209ENST00000520953 MEIS3P1A6NDR6 274 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 TRAPPC2LH3BP13 241 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 ARPC1BO15143 372 aaKnown RBP12.69□□□□□ -0.38
SREK1-209ENST00000520953 PTBP3O95758 552 aaKnown RBP12.69□□□□□ -0.38
SREK1-209ENST00000520953 CSTBP04080 98 aaKnown RBP12.69□□□□□ -0.38
SREK1-209ENST00000520953 DANCRP0C864 163 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 PGA5P0DJD9 388 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 TMEM50BP56557 158 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 SIGIRRQ6IA17 410 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 TMEM200AQ86VY9 491 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 MKXQ8IYA7 352 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 OSR2Q8N2R0 312 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 SPERTQ8NA61 448 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 ZFAND1Q8TCF1 268 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 SPOCK3Q9BQ16 436 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 TRAF4Q9BUZ4 470 aaPredicted RBP12.69□□□□□ -0.38
SREK1-209ENST00000520953 GCM1Q9NP62 436 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 IL36GQ9NZH8 169 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 GHRLQ9UBU3 117 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 RAI1Q7Z5J4 1906 aaPredicted RBP12.69□□□□□ -0.38
SREK1-209ENST00000520953 VSTM5A8MXK1 200 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 LY6HO94772 140 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 GTF2F2P13984 249 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 PRKACAP17612 351 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 PRSS3P35030 304 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 ERVK11-1P61568 191 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 SP5Q6BEB4 398 aaPredicted RBP12.69□□□□□ -0.38
SREK1-209ENST00000520953 BOLLQ8N9W6 283 aaKnown RBP12.69□□□□□ -0.38
SREK1-209ENST00000520953 OR4C16Q8NGL9 310 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 PTX4Q96A99 478 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 DACT3Q96B18 629 aaPredicted RBP12.69□□□□□ -0.38
SREK1-209ENST00000520953 NRIP2Q9BQI9 281 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 ZDHHC8Q9ULC8 765 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 LAMP3Q9UQV4 416 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 ST3GAL6Q9Y274 331 aa12.69□□□□□ -0.38
SREK1-209ENST00000520953 DYSFO75923 2080 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 POLQO75417 2590 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 FOXI3A8MTJ6 420 aaPredicted RBP12.68□□□□□ -0.38
SREK1-209ENST00000520953 FABP7O15540 132 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 TPD52L2O43399 206 aaKnown RBP12.68□□□□□ -0.38
SREK1-209ENST00000520953 FCER2P06734 321 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 CSF1P09603 554 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 GNB3P16520 340 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 CEBPDP49716 269 aaPredicted RBP12.68□□□□□ -0.38
SREK1-209ENST00000520953 C11orf71Q6IPW1 123 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 CDH24Q86UP0 819 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 SAXO1Q8IYX7 474 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 ASCC1Q8N9N2 400 aaKnown RBP12.68□□□□□ -0.38
SREK1-209ENST00000520953 CHST4Q8NCG5 386 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 OR4D10Q8NGI6 311 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 GPX8Q8TED1 209 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 LRRC29Q8WV35 223 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 EMG1Q92979 244 aaKnown RBP12.68□□□□□ -0.38
SREK1-209ENST00000520953 VRK1Q99986 396 aaPredicted RBP12.68□□□□□ -0.38
SREK1-209ENST00000520953 IL19Q9UHD0 177 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 ZNF222Q9UK12 451 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 KCNK7Q9Y2U2 307 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 ABCA12Q86UK0 2595 aa12.68□□□□□ -0.38
SREK1-209ENST00000520953 FAM221AA4D161 298 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.67□□□□□ -0.38
SREK1-209ENST00000520953 NDUFB6O95139 128 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 CYB5AP00167 134 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 CYB5R3P00387 301 aaPredicted RBP12.67□□□□□ -0.38
SREK1-209ENST00000520953 SULT1A3P0DMM9 295 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 SULT1A4P0DMN0 295 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 RBM11P57052 281 aaKnown RBP12.67□□□□□ -0.38
SREK1-209ENST00000520953 HIST2H2BCQ6DN03 193 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 SLC7A5P1Q8MH63 180 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 FAM89BQ8N5H3 189 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 Q8NFD4 153 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 DEDD2Q8WXF8 326 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 DYRK2Q92630 601 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 ARHGAP5-AS1Q96IT6 56 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 TM2D1Q9BX74 207 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 TAS2R8Q9NYW2 309 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 IGHV3OR15-7A0A075B7D8 119 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 TMEM235A6NFC5 223 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 LYNX1G3V0Z9 82 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 PRAF2O60831 178 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 LYNX1P0DP58 116 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 FGF12P61328 243 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 SNRPD2P62316 118 aaKnown RBP12.67□□□□□ -0.38
SREK1-209ENST00000520953 NKAPLQ5M9Q1 402 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 ELP2Q6IA86 826 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 LAMTOR1Q6IAA8 161 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 Q6ZTK2 550 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 C6orf201Q7Z4U5 140 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 FAM58AQ8N1B3 248 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 GCSAMQ8N6F7 178 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 POC1AQ8NBT0 407 aa12.67□□□□□ -0.38
SREK1-209ENST00000520953 OR5T2Q8NGG2 359 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms