RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 NPBWR2P48146 333 aa12.77□□□□□ -0.36
NUP54-217ENST00000514987 FXYD4P59646 89 aa12.77□□□□□ -0.36
NUP54-217ENST00000514987 CLN3Q13286 438 aa12.77□□□□□ -0.36
NUP54-217ENST00000514987 KIR2DS1Q14954 304 aa12.77□□□□□ -0.36
NUP54-217ENST00000514987 IL34Q6ZMJ4 242 aa12.77□□□□□ -0.36
NUP54-217ENST00000514987 GLRX5Q86SX6 157 aa12.77□□□□□ -0.36
NUP54-217ENST00000514987 NAXEQ8NCW5 288 aa12.77□□□□□ -0.36
NUP54-217ENST00000514987 OR1S2Q8NGQ3 325 aa12.77□□□□□ -0.36
NUP54-217ENST00000514987 OR1K1Q8NGR3 316 aa12.77□□□□□ -0.36
NUP54-217ENST00000514987 HPSE2Q8WWQ2 592 aa12.77□□□□□ -0.36
NUP54-217ENST00000514987 MRPL24Q96A35 216 aaKnown RBP12.77□□□□□ -0.36
NUP54-217ENST00000514987 C18orf12Q96KH6 178 aa12.77□□□□□ -0.36
NUP54-217ENST00000514987 NSG2Q9Y328 171 aa12.77□□□□□ -0.36
NUP54-217ENST00000514987 TRGV5A0A0B4J1U4 118 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 PIGBOS1A0A0B4J2F0 54 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 CD300LBA8K4G0 201 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 KCNAB3O43448 404 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 PPYP01298 95 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 OR5AC1P0C628 307 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 DUSP1P28562 367 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 GPM6AP51674 278 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 GPR157Q5UAW9 335 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 FBXW9Q5XUX1 488 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 BRICD5Q6PL45 260 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 NUFIP2Q7Z417 695 aaKnown RBP12.77□□□□□ -0.37
NUP54-217ENST00000514987 ZNF573Q86YE8 665 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 SPERTQ8NA61 448 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 BPIFCQ8NFQ6 507 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 TMED6Q8WW62 240 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 DYRK2Q92630 601 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 SLAMF9Q96A28 289 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 MARS2Q96GW9 593 aaKnown RBP12.77□□□□□ -0.37
NUP54-217ENST00000514987 TAF9BQ9HBM6 251 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 Q9N2K0 584 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 MMP26Q9NRE1 261 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 GLRX2Q9NS18 164 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 LPAR3Q9UBY5 353 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 TMED3Q9Y3Q3 217 aa12.77□□□□□ -0.37
NUP54-217ENST00000514987 LOC105371267A0A1B0GV96 52 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 FAM221AA4D161 298 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 SLC22A20A6NK97 555 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 NAPSAO96009 420 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 APOC3P02656 99 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 TK1P04183 234 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 FAM157CP0CG43 387 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 AADACP22760 399 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 FOXG1P55316 489 aaPredicted RBP12.76□□□□□ -0.37
NUP54-217ENST00000514987 RND3P61587 244 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 GNG3P63215 75 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 ARG2P78540 354 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 BTN1A1Q13410 526 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 IL13RA2Q14627 380 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 ZNF766Q5HY98 468 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.76□□□□□ -0.37
NUP54-217ENST00000514987 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.76□□□□□ -0.37
NUP54-217ENST00000514987 BHLHE23Q8NDY6 225 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 OR5P3Q8WZ94 311 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 BCL2L2Q92843 193 aaPredicted RBP12.76□□□□□ -0.37
NUP54-217ENST00000514987 WDYHV1Q96HA8 205 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 PKIBQ9C010 78 aa12.76□□□□□ -0.37
NUP54-217ENST00000514987 LRP3O75074 770 aa12.75□□□□□ -0.37
NUP54-217ENST00000514987 BLOC1S1P78537 153 aa12.75□□□□□ -0.37
NUP54-217ENST00000514987 IL24Q13007 206 aa12.75□□□□□ -0.37
NUP54-217ENST00000514987 MRPL49Q13405 166 aaKnown RBP12.75□□□□□ -0.37
NUP54-217ENST00000514987 MSI2Q96DH6 328 aaKnown RBP12.75□□□□□ -0.37
NUP54-217ENST00000514987 ZDHHC11Q9H8X9 412 aa12.75□□□□□ -0.37
NUP54-217ENST00000514987 R4GN57 208 aa12.75□□□□□ -0.37
NUP54-217ENST00000514987 TRBV6-6A0A0A6YYG2 114 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 DUXBA0A1W2PPF3 345 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 ZNF503-AS2A6NEH8 195 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 ZNF705EA8MWA4 302 aaPredicted RBP12.74□□□□□ -0.37
NUP54-217ENST00000514987 TRDCB7Z8K6 153 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 MPPED1O15442 326 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 CCL2P13500 99 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 DAZAP2Q15038 168 aaPredicted RBP12.74□□□□□ -0.37
NUP54-217ENST00000514987 TRIP6Q15654 476 aaKnown RBP12.74□□□□□ -0.37
NUP54-217ENST00000514987 PHLDA2Q53GA4 152 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 FOXRED2Q8IWF2 684 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 ZNF565Q8N9K5 539 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 OR5T2Q8NGG2 359 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 LHFPL5Q8TAF8 219 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 GLYATL2Q8WU03 294 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 GMPPAQ96IJ6 420 aaPredicted RBP12.74□□□□□ -0.37
NUP54-217ENST00000514987 SMIM8Q96KF7 97 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 SPIN2AQ99865 258 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 SPIN2BQ9BPZ2 258 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 DEFB127Q9H1M4 99 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 IFT22Q9H7X7 185 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 OR2S2Q9NQN1 319 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 MTCH1Q9NZJ7 389 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 PRSS50Q9UI38 385 aa12.74□□□□□ -0.37
NUP54-217ENST00000514987 LSM5Q9Y4Y9 91 aaKnown RBP12.74□□□□□ -0.37
NUP54-217ENST00000514987 BORCS7-ASMTA0A0B4J1R7 106 aa12.73□□□□□ -0.37
NUP54-217ENST00000514987 C3orf85A0A1B0GTC6 90 aa12.73□□□□□ -0.37
NUP54-217ENST00000514987 TMEM218A2RU14 115 aa12.73□□□□□ -0.37
NUP54-217ENST00000514987 ARGFXA6NJG6 315 aa12.73□□□□□ -0.37
NUP54-217ENST00000514987 PHF1O43189 567 aaPredicted RBP12.73□□□□□ -0.37
NUP54-217ENST00000514987 GPR137BO60478 399 aa12.73□□□□□ -0.37
NUP54-217ENST00000514987 CDS2O95674 445 aa12.73□□□□□ -0.37
NUP54-217ENST00000514987 IL18BPO95998 194 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms