RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 LTC4SQ16873 150 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 CT45A2Q5DJT8 189 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 NEIL1Q96FI4 390 aaPredicted RBP15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 GREM1O60565 184 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 ACAA1P09110 424 aaPredicted RBP15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 MRGPRGQ86SM5 289 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 RPS19BP1Q86WX3 136 aaKnown RBP15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 FGF8P55075 233 aaPredicted RBP15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 GFERP55789 205 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 ZDHHC23Q8IYP9 409 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 IL22RA2Q969J5 263 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 RTL8AQ9BWD3 113 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 POLDIP2Q9Y2S7 368 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 THY1P04216 161 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 PRF1P14222 555 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 GALNSP34059 522 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 GAS1P54826 345 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 RAB35Q15286 201 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 MPV17LQ2QL34 196 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 SLC35E3Q7Z769 313 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 TCTEX1D1Q8N7M0 179 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 ADPRHL1Q8NDY3 354 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 OR1F12Q8NHA8 337 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 CMTM2Q8TAZ6 248 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 REG4Q9BYZ8 158 aa15.19■□□□□ 0.02
HMGXB3-201ENST00000502717 ACTL6AO96019 429 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 PEBP1P30086 187 aaKnown RBP15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 P2RY4P51582 365 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 SLC10A1Q14973 349 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 C10orf35Q96D05 121 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 FAM122AQ96E09 287 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 ZNF729A6NN14 1252 aaPredicted RBP15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 CHRNA7P36544 502 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 LINC01590Q5TEZ4 76 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 AUP1Q9Y679 476 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 TRAV14DV4A0A0A6YYC5 116 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 A0A1W2PNV4 684 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 LILRA5A6NI73 299 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 TERTO14746 1132 aaKnown RBP15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 TOX4O94842 621 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 HSPB1P04792 205 aaKnown RBP15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 IL9P15248 144 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 GPR3P46089 330 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 EFNB1P98172 346 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 FAM78BQ5VT40 261 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 ZNF385CQ66K41 422 aaPredicted RBP15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 REC114Q7Z4M0 266 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 CYB561D1Q8N8Q1 229 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 DEFB124Q8NES8 71 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 OR13G1Q8NGZ3 307 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 RHOVQ96L33 236 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 CACFD1Q9UGQ2 172 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 CHST1O43916 411 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 COL19A1Q14993 1142 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 DEFB109BQ30KR1 87 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 FFAR4Q5NUL3 377 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 FDX2Q6P4F2 183 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 C17orf78Q8N4C9 275 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 CLDN23Q96B33 292 aa15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 KLF13Q9Y2Y9 288 aaPredicted RBP15.18■□□□□ 0.02
HMGXB3-201ENST00000502717 RNF222A6NCQ9 220 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 GCGP01275 180 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 IGKV1D-16P01601 117 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 IFI6P09912 130 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 OR10C1Q96KK4 312 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 AMELYQ99218 206 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 STARD10Q9Y365 291 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 C5orf67F2Z3F1 127 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 HRKO00198 91 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 PITX3O75364 302 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 CLN5O75503 358 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 RPS11P62280 158 aaKnown RBP eCLIP15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 SMIM15Q7Z3B0 74 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 TMEM52Q8NDY8 209 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 SLC24A4Q8NFF2 622 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 SARAFQ96BY9 339 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 THOC3Q96J01 351 aaKnown RBP15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 MANBALQ9NQG1 85 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 SCN10AQ9Y5Y9 1956 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 SH2D1BO14796 132 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 ISG15P05161 165 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 TAS2R45P59539 299 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 TFF2Q03403 129 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 CADM4Q8NFZ8 388 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 ROBO4Q8WZ75 1007 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 LPAR5Q9H1C0 372 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 WDR13Q9H1Z4 485 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 CYB5R3P00387 301 aaPredicted RBP15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 TTRP02766 147 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 NGFRP08138 427 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 GLB1P16278 677 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 ZNF17P17021 662 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 ATP6V1FQ16864 119 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 HLA-BQ31612 363 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 TBC1D26Q86UD7 250 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 LSRQ86X29 649 aaPredicted RBP15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 KDF1Q8NAX2 398 aaPredicted RBP15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 GDF15Q99988 308 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 GPR61Q9BZJ8 451 aa15.17■□□□□ 0.02
HMGXB3-201ENST00000502717 PTTG1IPP53801 180 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms