RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 FAM3BP58499 235 aaPredicted RBP13.08□□□□□ -0.32
MACF1-223ENST00000496360 RPS21P63220 83 aaKnown RBP13.08□□□□□ -0.32
MACF1-223ENST00000496360 C4orf17Q53FE4 359 aa13.08□□□□□ -0.32
MACF1-223ENST00000496360 FAM90A2PQ658T7 463 aa13.08□□□□□ -0.32
MACF1-223ENST00000496360 CADM4Q8NFZ8 388 aa13.08□□□□□ -0.32
MACF1-223ENST00000496360 SLAMF6Q96DU3 332 aa13.08□□□□□ -0.32
MACF1-223ENST00000496360 APOOQ9BUR5 198 aa13.08□□□□□ -0.32
MACF1-223ENST00000496360 OPN3Q9H1Y3 402 aaPredicted RBP13.08□□□□□ -0.32
MACF1-223ENST00000496360 BANF2Q9H503 90 aa13.08□□□□□ -0.32
MACF1-223ENST00000496360 PTRH2Q9Y3E5 179 aaKnown RBP13.08□□□□□ -0.32
MACF1-223ENST00000496360 STMND1H3BQB6 276 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 XRCC2O43543 280 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 ADH1BP00325 375 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 CST2P09228 141 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 ZNF728P0DKX0 622 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 POLR2HP52434 150 aaKnown RBP13.07□□□□□ -0.32
MACF1-223ENST00000496360 UCP3P55916 312 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 COL10A1Q03692 680 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 HERPUD1Q15011 391 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 SLC23A3Q6PIS1 610 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 RABEPKQ7Z6M1 372 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 PRR18Q8N4B5 295 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 CCDC71LQ8N9Z2 235 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 HIST1H2AAQ96QV6 131 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 PRTFDC1Q9NRG1 225 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 TBC1D29Q9UFV1 150 aa13.07□□□□□ -0.32
MACF1-223ENST00000496360 A0A0J9YY10 115 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 LOC101059948A0A1B0GTJ6 334 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 A0A1W2PQD3 144 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 DIRAS3O95661 229 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 CFIP05156 583 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 BLVRBP30043 206 aaPredicted RBP13.06□□□□□ -0.32
MACF1-223ENST00000496360 OR3A1P47881 315 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 OTPQ5XKR4 325 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 RTN4IP1Q8WWV3 396 aaPredicted RBP13.06□□□□□ -0.32
MACF1-223ENST00000496360 BTF3L4Q96K17 158 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 GPER1Q99527 375 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 PCED1AQ9H1Q7 454 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 NECAP2Q9NVZ3 263 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 SPTBP11277 2137 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 TRPM6Q9BX84 2022 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 METTL12A8MUP2 240 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 HRKO00198 91 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 MPZL1O95297 269 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 AHSA1O95433 338 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 DTYMKP23919 212 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 PMS2P11Q13670 270 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 CST6Q15828 149 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 NNATQ16517 81 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 CYB5R2Q6BCY4 276 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 DOK3Q7L591 496 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 CMTM1Q8IZ96 169 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 SLC38A9Q8NBW4 561 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 ASB10Q8WXI3 467 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 TSLPQ969D9 159 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 AGMATQ9BSE5 352 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 TMEM9BQ9NQ34 198 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 LYRM2Q9NU23 88 aaPredicted RBP13.06□□□□□ -0.32
MACF1-223ENST00000496360 ANXA10Q9UJ72 324 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 RNF150Q9ULK6 438 aa13.06□□□□□ -0.32
MACF1-223ENST00000496360 PRSS38A1L453 326 aa13.05□□□□□ -0.32
MACF1-223ENST00000496360 PFN1P07737 140 aaKnown RBP13.05□□□□□ -0.32
MACF1-223ENST00000496360 FGF5P12034 268 aa13.05□□□□□ -0.32
MACF1-223ENST00000496360 OR10J1P30954 320 aa13.05□□□□□ -0.32
MACF1-223ENST00000496360 LYZL2Q7Z4W2 148 aa13.05□□□□□ -0.32
MACF1-223ENST00000496360 CENPVQ7Z7K6 275 aaPredicted RBP13.05□□□□□ -0.32
MACF1-223ENST00000496360 THNSL2Q86YJ6 484 aa13.05□□□□□ -0.32
MACF1-223ENST00000496360 LINC00346Q8IVM7 164 aa13.05□□□□□ -0.32
MACF1-223ENST00000496360 MSI2Q96DH6 328 aaKnown RBP13.05□□□□□ -0.32
MACF1-223ENST00000496360 CACNA1EQ15878 2313 aa13.05□□□□□ -0.32
MACF1-223ENST00000496360 TM4SF5O14894 197 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 SEMA4FO95754 770 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 BCL2P10415 239 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 RANP62826 216 aaKnown RBP13.04□□□□□ -0.32
MACF1-223ENST00000496360 MRPS11P82912 194 aaKnown RBP13.04□□□□□ -0.32
MACF1-223ENST00000496360 COTL1Q14019 142 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 C21orf62-AS1Q17RA5 79 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 IMMP2LQ96T52 175 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 KCNK17Q96T54 332 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 GPR173Q9NS66 373 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 ZNF701Q9NV72 531 aaPredicted RBP13.04□□□□□ -0.32
MACF1-223ENST00000496360 MPDZO75970 2070 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 DUXBA0A1W2PPF3 345 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 FRG2CA6NGY1 282 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 NPIPA5E9PKD4 350 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 TGFBR3LH3BV60 316 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 CDX4O14627 284 aaPredicted RBP13.04□□□□□ -0.32
MACF1-223ENST00000496360 HCRTR2O43614 444 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 IFNA1P01562 189 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 TAS2R30P59541 319 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 RAB11AP62491 216 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 ZFP36L1Q07352 338 aaKnown RBP13.04□□□□□ -0.32
MACF1-223ENST00000496360 MRPL41Q8IXM3 137 aaKnown RBP13.04□□□□□ -0.32
MACF1-223ENST00000496360 FAM185AQ8N0U4 392 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 OR51E1Q8TCB6 317 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 BMFQ96LC9 184 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 ZNF385AQ96PM9 386 aaKnown RBP13.04□□□□□ -0.32
MACF1-223ENST00000496360 Q9N2K0 584 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 NAT8Q9UHE5 227 aa13.04□□□□□ -0.32
MACF1-223ENST00000496360 NPIPA1Q9UND3 350 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms