RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 AADACL3Q5VUY0 350 aa11.69□□□□□ -0.54
GPC1-209ENST00000495100 PRSS54Q6PEW0 395 aa11.69□□□□□ -0.54
GPC1-209ENST00000495100 MKXQ8IYA7 352 aa11.69□□□□□ -0.54
GPC1-209ENST00000495100 CDX2Q99626 313 aaPredicted RBP11.69□□□□□ -0.54
GPC1-209ENST00000495100 NCOR2Q9Y618 2525 aa11.69□□□□□ -0.54
GPC1-209ENST00000495100 A0A0U1RQK1 487 aa11.69□□□□□ -0.54
GPC1-209ENST00000495100 ARGFXA6NJG6 315 aa11.69□□□□□ -0.54
GPC1-209ENST00000495100 EIF5AP63241 154 aaKnown RBP11.69□□□□□ -0.54
GPC1-209ENST00000495100 EDDM3AQ14507 147 aa11.69□□□□□ -0.54
GPC1-209ENST00000495100 SSX9Q7RTT3 188 aa11.69□□□□□ -0.54
GPC1-209ENST00000495100 DEFB123Q8N688 67 aa11.69□□□□□ -0.54
GPC1-209ENST00000495100 NECAP1Q8NC96 275 aa11.69□□□□□ -0.54
GPC1-209ENST00000495100 HAS2Q92819 552 aa11.69□□□□□ -0.54
GPC1-209ENST00000495100 CCL28Q9NRJ3 127 aa11.69□□□□□ -0.54
GPC1-209ENST00000495100 COLQQ9Y215 455 aaPredicted RBP11.69□□□□□ -0.54
GPC1-209ENST00000495100 HSPB2A8KAH6 182 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 UMAD1C9J7I0 102 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 ST8SIA3O43173 380 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 CEBPDP49716 269 aaPredicted RBP11.68□□□□□ -0.54
GPC1-209ENST00000495100 HSPB2Q16082 182 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 FIP1L1Q6UN15 594 aaKnown RBP11.68□□□□□ -0.54
GPC1-209ENST00000495100 ADPRHL1Q8NDY3 354 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 KIRREL1Q96J84 757 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 ALX4Q9H161 411 aaPredicted RBP11.68□□□□□ -0.54
GPC1-209ENST00000495100 BCO1Q9HAY6 547 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 TREM2Q9NZC2 230 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 TRAPPC2LQ9UL33 140 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 TIMM10BQ9Y5J6 103 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 IGF2RP11717 2491 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 DMXL2Q8TDJ6 3036 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 A0A1W2PPH5 198 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 SMCO3A2RU48 225 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 ZNF727A8MUV8 499 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 MFNGO00587 321 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 PTGDSP41222 190 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 SLC26A1Q9H2B4 701 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 DNAJB11Q9UBS4 358 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 PINLYPA6NC86 204 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 DNASE2O00115 360 aaPredicted RBP11.68□□□□□ -0.54
GPC1-209ENST00000495100 LYZL6O75951 148 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 PLA2G5P39877 138 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 NKX2-1P43699 371 aaPredicted RBP11.68□□□□□ -0.54
GPC1-209ENST00000495100 CCL11P51671 97 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 PJVKQ0ZLH3 352 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 KMT5CQ86Y97 462 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 SLC35G3Q8N808 338 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 CHST5Q9GZS9 411 aa11.68□□□□□ -0.54
GPC1-209ENST00000495100 ERRFI1Q9UJM3 462 aaPredicted RBP11.68□□□□□ -0.54
GPC1-209ENST00000495100 IGKV1-27A0A075B6S5 117 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 IGHV3-43A0A0B4J1X8 118 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 SYNGR1O43759 233 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 MBPP02686 304 aaPredicted RBP11.67□□□□□ -0.54
GPC1-209ENST00000495100 IGHV3-43DP0DP04 118 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 CSRP1P21291 193 aaKnown RBP11.67□□□□□ -0.54
GPC1-209ENST00000495100 PPP1CCP36873 323 aaKnown RBP11.67□□□□□ -0.54
GPC1-209ENST00000495100 FABP6P51161 128 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 RPUSD3Q6P087 351 aaKnown RBP11.67□□□□□ -0.54
GPC1-209ENST00000495100 GAPTQ8N292 157 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 OR2Y1Q8NGV0 311 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 RARRES2Q99969 163 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 OBP2BQ9NPH6 170 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 SLC2A8Q9NY64 477 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 LPAR3Q9UBY5 353 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 DUSP13Q9UII6 198 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 NOTCH3Q9UM47 2321 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 C1orf196B1AJZ1 125 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 IGLV3-19P01714 112 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 ZNF708P17019 499 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 SUMO3P55854 103 aaPredicted RBP11.67□□□□□ -0.54
GPC1-209ENST00000495100 RAC1P63000 192 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 SPANXN5Q5MJ07 72 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 NCMAPQ5T1S8 102 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 THNSL2Q86YJ6 484 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 OR4A4PQ8NGN8 299 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 OR5C1Q8NGR4 320 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 CPNE4Q96A23 557 aaPredicted RBP11.67□□□□□ -0.54
GPC1-209ENST00000495100 AIFM2Q9BRQ8 373 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 MOB1AQ9H8S9 216 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 FAM212BQ9NTI7 297 aaPredicted RBP11.67□□□□□ -0.54
GPC1-209ENST00000495100 DEPPQ9NTK1 212 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 GNG13Q9P2W3 67 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 TCFL5Q9UL49 500 aa11.67□□□□□ -0.54
GPC1-209ENST00000495100 IGHV1-45A0A0A0MS14 117 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 SERPINE3A8MV23 424 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 SLC34A2O95436 690 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 APOC1P02654 83 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 COX6A1P12074 109 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 ZP4Q12836 540 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 ZNF154Q13106 437 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 SOHLH1Q5JUK2 328 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 SUMF2Q8NBJ7 301 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 OR2V1Q8NHB1 315 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 PP6455Q8WZ26 134 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 LIME1Q9H400 295 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 AURKAIP1Q9NWT8 199 aaPredicted RBP11.66□□□□□ -0.54
GPC1-209ENST00000495100 IL17BQ9UHF5 180 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 STARD10Q9Y365 291 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 IGKV1-12A0A0C4DH73 117 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 TRIM77I1YAP6 450 aa11.66□□□□□ -0.54
GPC1-209ENST00000495100 LDLRAD4O15165 306 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 369.7 ms