RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 FAM27D1Q5T7N8 215 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 C2orf50Q96LR7 162 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 SLIRPQ9GZT3 109 aaKnown RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 ZNF541Q9H0D2 1346 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 ASPDHA6ND91 283 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 PAPLNO95428 1278 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 CD37P11049 281 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 CD44P16070 742 aaKnown RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 RPL12P30050 165 aaKnown RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 SRSF4Q08170 494 aaKnown RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 ASCL4Q6XD76 172 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 LPPQ93052 612 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 SMIM19Q96E16 107 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 GATA5Q9BWX5 397 aaPredicted RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 ZNF629Q9UEG4 869 aaPredicted RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 ZDHHC8Q9ULC8 765 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 SF3B6Q9Y3B4 125 aaKnown RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 OR51B4Q9Y5P0 310 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 USP54Q70EL1 1684 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 HEATR5AQ86XA9 2040 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 COL3A1P02461 1466 aaPredicted RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 CLDN5O00501 218 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 GP1BAP07359 652 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 GDNFP39905 211 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 RPL8P62917 257 aaKnown RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 TSPAN31Q12999 210 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 OR1Q1Q15612 314 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 CBLN2Q8IUK8 224 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 RNF182Q8N6D2 247 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 BCORP1Q8N888 145 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 DRAXINQ8NBI3 349 aaPredicted RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 SLC35B2Q8TB61 432 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 SSBP4Q9BWG4 385 aaPredicted RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 PRDM14Q9GZV8 571 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 OR2D2Q9H210 308 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 KIF13BQ9NQT8 1826 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 A0A1W2PP55 124 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 CD3DP04234 171 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 RACK1P63244 317 aaKnown RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 IL13RA2Q14627 380 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 PLK5Q496M5 336 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 C10orf113Q5VZT2 155 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 METTL27Q8N6F8 245 aaPredicted RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 OR4C13Q8NGP0 309 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 NUBPLQ8TB37 319 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 FAM216AQ8WUB2 273 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 NUDT8Q8WV74 236 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 MAGT1Q9H0U3 335 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 SLC35B3Q9H1N7 401 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 DAPP1Q9UN19 280 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 C19orf53Q9UNZ5 99 aaPredicted RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 HIGD1AQ9Y241 93 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 MCM3APO60318 1980 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 KLK7P49862 253 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 IFITM3Q01628 133 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 ST3GAL2Q16842 350 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 ZNF678Q5SXM1 525 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 DLEU7Q6UYE1 221 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 SERGEFQ9UGK8 458 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 GDF2Q9UK05 429 aaPredicted RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 PREX1Q8TCU6 1659 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 C2CD4BA6NLJ0 364 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 SDC1P18827 310 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 ECM1Q16610 540 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 C6orf136Q5SQH8 315 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 IRF2BP1Q8IU81 584 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 SPPL3Q8TCT6 385 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 FAM163AQ96GL9 167 aaPredicted RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 GUCD1Q96NT3 240 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 LRRC61Q9BV99 259 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 ZBP1Q9H171 429 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 MRPL16Q9NX20 251 aaKnown RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 PEF1Q9UBV8 284 aaKnown RBP4.86□□□□□ -1.63
USF3-202ENST00000478658 LTN1O94822 1766 aa4.86□□□□□ -1.63
USF3-202ENST00000478658 FEZF1A0PJY2 475 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 TDGF1P13385 188 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 ADRA1AP35348 466 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 PMS2P11Q13670 270 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 CST9LQ9H4G1 147 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 PDZD7Q9H5P4 517 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 GPR35Q9HC97 309 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 ASB1Q9Y576 335 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 KIAA2026Q5HYC2 2103 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 TMEM189A5PLL7 270 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 HSPB6O14558 160 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 PTGESO14684 152 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 FCGR3BO75015 233 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 SRIP30626 198 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 SPINT3P49223 89 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 SLC35E3Q7Z769 313 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 OSR2Q8N2R0 312 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 MRGPRX1Q96LB2 322 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 SORT1Q99523 831 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 GORASP2Q9H8Y8 452 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 RABAC1Q9UI14 185 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 E9PCH4 1651 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 RGPD4Q7Z3J3 1758 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 ASCC3Q8N3C0 2202 aaKnown RBP4.85□□□□□ -1.63
USF3-202ENST00000478658 CD5LO43866 347 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 SRD5A1P18405 259 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms