RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 GPR87Q9BY21 358 aa11.34□□□□□ -0.59
CCNL1-216ENST00000475298 DEFB126Q9BYW3 111 aa11.34□□□□□ -0.59
CCNL1-216ENST00000475298 ASCL3Q9NQ33 180 aa11.34□□□□□ -0.59
CCNL1-216ENST00000475298 ZNF319Q9P2F9 582 aa11.34□□□□□ -0.59
CCNL1-216ENST00000475298 RER1O15258 196 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 OR4A8P0C604 315 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 TBPP20226 339 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 COTL1Q14019 142 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 HLA-BQ31612 363 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 SLC25A53Q5H9E4 307 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 NKAIN3Q8N8D7 197 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 NPRL2Q8WTW4 380 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 SPACA9Q96E40 222 aaPredicted RBP11.33□□□□□ -0.6
CCNL1-216ENST00000475298 PRRX2Q99811 253 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 SMDT1Q9H4I9 107 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 PLEKHA2Q9HB19 425 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 SIT1Q9Y3P8 196 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 PRH1P02810 166 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 VSIG8P0DPA2 414 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 HSD11B1P28845 292 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 AADACL3Q5VUY0 350 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 DTWD2Q8NBA8 298 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 NICN1Q9BSH3 213 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 DUSP23Q9BVJ7 150 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 TCFL5Q9UL49 500 aa11.33□□□□□ -0.6
CCNL1-216ENST00000475298 STRAPQ9Y3F4 350 aaKnown RBP11.33□□□□□ -0.6
CCNL1-216ENST00000475298 C5orf63A6NC05 138 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 G3V3Y1 287 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 ATXN7O15265 892 aaPredicted RBP11.32□□□□□ -0.6
CCNL1-216ENST00000475298 IGHG1P01857 330 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 SRP19P09132 144 aaKnown RBP11.32□□□□□ -0.6
CCNL1-216ENST00000475298 GABRR1P24046 479 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 CLN3Q13286 438 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 TEX38Q6PEX7 206 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 ABHD12BQ7Z5M8 362 aaPredicted RBP11.32□□□□□ -0.6
CCNL1-216ENST00000475298 B3GALT1Q9Y5Z6 326 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 NCOA6Q14686 2063 aaPredicted RBP11.32□□□□□ -0.6
CCNL1-216ENST00000475298 IGLV3-32A0A0A0MS00 114 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 RBFOX3A6NFN3 312 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 K7N7A8 449 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 DKK1O94907 266 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 GCGP01275 180 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 ERVFC1-1P60608 527 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 QRFPP83859 136 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 IAH1Q2TAA2 248 aaPredicted RBP11.32□□□□□ -0.6
CCNL1-216ENST00000475298 DMRTA1Q5VZB9 504 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 ZNF429Q86V71 674 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 LFNGQ8NES3 379 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 OR8B12Q8NGG6 310 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 OR2AJ1Q8NGZ0 328 aa11.32□□□□□ -0.6
CCNL1-216ENST00000475298 FAM71F1Q96KD3 344 aaPredicted RBP11.32□□□□□ -0.6
CCNL1-216ENST00000475298 CHCHD2Q9Y6H1 151 aaPredicted RBP11.32□□□□□ -0.6
CCNL1-216ENST00000475298 IGHV3-15A0A0B4J1V0 119 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 E9PLN8 166 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 P2RY1P47900 373 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 ZNF121P58317 390 aaPredicted RBP11.31□□□□□ -0.6
CCNL1-216ENST00000475298 RND3P61587 244 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 TRA2AQ13595 282 aaKnown RBP eCLIP11.31□□□□□ -0.67e-12■■■□□ 15.7
CCNL1-216ENST00000475298 AARDQ4LEZ3 155 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 MRPL14Q6P1L8 145 aaKnown RBP11.31□□□□□ -0.6
CCNL1-216ENST00000475298 CDH20Q9HBT6 801 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 RCL1Q9Y2P8 373 aaKnown RBP11.31□□□□□ -0.6
CCNL1-216ENST00000475298 MEMO1Q9Y316 297 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 A0A1W2PP11 408 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 CDRT15L2A8MXV6 281 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 ZNF878C9JN71 531 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 TP53I11O14683 189 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 DFFBO76075 338 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 ZNF43P17038 809 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 FUT3P21217 361 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 GLRA1P23415 457 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 FPR2P25090 351 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 CEBPGP53567 150 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 PCOLCEQ15113 449 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 VAX1Q5SQQ9 334 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 ZNF774Q6NX45 483 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 SPSB3Q6PJ21 355 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 SLC25A47Q6Q0C1 308 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 SLC22A24Q8N4F4 322 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 FAM213BQ8TBF2 198 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 TVP23CQ96ET8 276 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 GPR84Q9NQS5 396 aa11.31□□□□□ -0.6
CCNL1-216ENST00000475298 TMEM210A6NLX4 147 aa11.3□□□□□ -0.6
CCNL1-216ENST00000475298 SCAF4O95104 1147 aaKnown RBP11.3□□□□□ -0.6
CCNL1-216ENST00000475298 TK1P04183 234 aa11.3□□□□□ -0.6
CCNL1-216ENST00000475298 CFIP05156 583 aa11.3□□□□□ -0.6
CCNL1-216ENST00000475298 RPLP1P05386 114 aaKnown RBP11.3□□□□□ -0.6
CCNL1-216ENST00000475298 ZNF20P17024 532 aa11.3□□□□□ -0.6
CCNL1-216ENST00000475298 MDKP21741 143 aaPredicted RBP11.3□□□□□ -0.6
CCNL1-216ENST00000475298 ZNF93P35789 620 aaPredicted RBP11.3□□□□□ -0.6
CCNL1-216ENST00000475298 CLDN17P56750 224 aa11.3□□□□□ -0.6
CCNL1-216ENST00000475298 GABREP78334 506 aa11.3□□□□□ -0.6
CCNL1-216ENST00000475298 PAX5Q02548 391 aa11.3□□□□□ -0.6
CCNL1-216ENST00000475298 HERPUD1Q15011 391 aa11.3□□□□□ -0.6
CCNL1-216ENST00000475298 RSPO4Q2I0M5 234 aaPredicted RBP11.3□□□□□ -0.6
CCNL1-216ENST00000475298 ARSJQ5FYB0 599 aaPredicted RBP11.3□□□□□ -0.6
CCNL1-216ENST00000475298 C1orf87Q8N0U7 546 aa11.3□□□□□ -0.6
CCNL1-216ENST00000475298 SLC35G3Q8N808 338 aa11.3□□□□□ -0.6
CCNL1-216ENST00000475298 CYB561D1Q8N8Q1 229 aa11.3□□□□□ -0.6
CCNL1-216ENST00000475298 OR5D14Q8NGL3 314 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms