RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 IL36RNQ9UBH0 155 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 DUX4Q9UBX2 424 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 SOX21Q9Y651 276 aaPredicted RBP7.57□□□□□ -1.2
SMC4-213ENST00000472282 U3KQE9 123 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 IGKV1D-17A0A075B6S4 117 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 NKX6-3A6NJ46 265 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 TRIM64CA6NLI5 447 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 A8MXK9 166 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 TNFRSF13BO14836 293 aaPredicted RBP7.56□□□□□ -1.2
SMC4-213ENST00000472282 NDUFA2O43678 99 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 FOXH1O75593 365 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 ACAA1P09110 424 aaPredicted RBP7.56□□□□□ -1.2
SMC4-213ENST00000472282 WNT2P09544 360 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 TMEM225BP0DP42 221 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 CALCBP10092 127 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 PSG2P11465 335 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 SELLP14151 372 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 AMY2BP19961 511 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 PITPNBP48739 271 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 CEBPDP49716 269 aaPredicted RBP7.56□□□□□ -1.2
SMC4-213ENST00000472282 SNU13P55769 128 aaKnown RBP7.56□□□□□ -1.2
SMC4-213ENST00000472282 GNB2P62879 340 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 C12orf54Q6X4T0 127 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 Q8IYB0 196 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 SAXO1Q8IYX7 474 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 NKAIN3Q8N8D7 197 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 ANGPTL6Q8NI99 470 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 NANPQ8TBE9 248 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 PHYHIPQ92561 330 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 C12orf43Q96C57 262 aaKnown RBP7.56□□□□□ -1.2
SMC4-213ENST00000472282 C1orf147Q96MC9 270 aaPredicted RBP7.56□□□□□ -1.2
SMC4-213ENST00000472282 ZNF48Q96MX3 618 aaPredicted RBP7.56□□□□□ -1.2
SMC4-213ENST00000472282 GAFA1Q96PS6 74 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 SSBP3Q9BWW4 388 aaPredicted RBP7.56□□□□□ -1.2
SMC4-213ENST00000472282 TCF7L1Q9HCS4 588 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 EXOSC4Q9NPD3 245 aaKnown RBP7.56□□□□□ -1.2
SMC4-213ENST00000472282 RASL12Q9NYN1 266 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 ZNF69Q9UC07 566 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 OR14J1Q9UGF5 321 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 ZNF222Q9UK12 451 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 POLR3KQ9Y2Y1 108 aaPredicted RBP7.56□□□□□ -1.2
SMC4-213ENST00000472282 INSIG2Q9Y5U4 225 aa7.56□□□□□ -1.2
SMC4-213ENST00000472282 IGHV3OR16-10A0A075B7F0 116 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 PPIAL4CA0A0B4J2A2 164 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 TRDV1A0A1B0GX56 115 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 TMEM89A2RUT3 159 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 RFPL4AA6NLU0 287 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 RFPL4AL1F8VTS6 287 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 DVL1O14640 695 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 FCN3O75636 299 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 ARL6IP5O75915 188 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 KDM4BO94953 1096 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 CDRT1O95170 752 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 SFTPBP07988 381 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 PRKACAP17612 351 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 SRMP19623 302 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 GATA3P23771 443 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 CALRP27797 417 aaKnown RBP7.55□□□□□ -1.2
SMC4-213ENST00000472282 PTGFRP43088 359 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 ACTG1P63261 375 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 PAX2Q02962 417 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 ATPAF1Q5TC12 328 aaPredicted RBP7.55□□□□□ -1.2
SMC4-213ENST00000472282 WDR25Q64LD2 544 aaPredicted RBP7.55□□□□□ -1.2
SMC4-213ENST00000472282 C22orf42Q6IC83 251 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 CD200R1LQ6Q8B3 271 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 ZNF841Q6ZN19 808 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 ZNF788Q6ZQV5 615 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 USP43Q70EL4 1123 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 SLC36A1Q7Z2H8 476 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 LRRTM1Q86UE6 522 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 FAM58AQ8N1B3 248 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 FGFRL1Q8N441 504 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 CD177Q8N6Q3 437 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 PNLDC1Q8NA58 520 aaKnown RBP7.55□□□□□ -1.2
SMC4-213ENST00000472282 ZSCAN4Q8NAM6 433 aaPredicted RBP7.55□□□□□ -1.2
SMC4-213ENST00000472282 PXT1Q8NFP0 134 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 OR10K1Q8NGX5 313 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 FAM216AQ8WUB2 273 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 ZFAND2BQ8WV99 257 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 ST8SIA4Q92187 359 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 TAF15Q92804 592 aaKnown RBP eCLIP7.55□□□□□ -1.27e-26■■■■□ 25.9
SMC4-213ENST00000472282 DACT3Q96B18 629 aaPredicted RBP7.55□□□□□ -1.2
SMC4-213ENST00000472282 DUX5Q96PT3 197 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 DNTTIP1Q9H147 329 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 SLITRK2Q9H156 845 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 OR51E2Q9H255 320 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 CNTD2Q9H8S5 307 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 ELL3Q9HB65 397 aaPredicted RBP7.55□□□□□ -1.2
SMC4-213ENST00000472282 HMG20AQ9NP66 347 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 KAAG1Q9UBP8 84 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 CLN8Q9UBY8 286 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 STUB1Q9UNE7 303 aa7.55□□□□□ -1.2
SMC4-213ENST00000472282 SHISA3A0PJX4 238 aa7.54□□□□□ -1.2
SMC4-213ENST00000472282 TRIM77I1YAP6 450 aa7.54□□□□□ -1.2
SMC4-213ENST00000472282 SIGLEC5O15389 551 aa7.54□□□□□ -1.2
SMC4-213ENST00000472282 NDUFB3O43676 98 aa7.54□□□□□ -1.2
SMC4-213ENST00000472282 HTR3BO95264 441 aa7.54□□□□□ -1.2
SMC4-213ENST00000472282 KNG1P01042 644 aa7.54□□□□□ -1.2
SMC4-213ENST00000472282 CD36P16671 472 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms