RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 ZNF596Q8TC21 504 aa18.23■□□□□ 0.51
USP42-205ENST00000465073 CAPSLQ8WWF8 208 aa18.23■□□□□ 0.51
USP42-205ENST00000465073 RFKQ969G6 155 aa18.23■□□□□ 0.51
USP42-205ENST00000465073 GAL3ST2Q9H3Q3 398 aa18.23■□□□□ 0.51
USP42-205ENST00000465073 TRGV10A0A0A0MS01 117 aa18.22■□□□□ 0.51
USP42-205ENST00000465073 IGKV1-9A0A0C4DH69 117 aa18.22■□□□□ 0.51
USP42-205ENST00000465073 FUOMA2VDF0 154 aa18.22■□□□□ 0.51
USP42-205ENST00000465073 SH2D1BO14796 132 aa18.22■□□□□ 0.51
USP42-205ENST00000465073 ATF1P18846 271 aa18.22■□□□□ 0.51
USP42-205ENST00000465073 ARHGDIBP52566 201 aa18.22■□□□□ 0.51
USP42-205ENST00000465073 PDZK1IP1Q13113 114 aa18.22■□□□□ 0.51
USP42-205ENST00000465073 LHFPL2Q6ZUX7 228 aa18.22■□□□□ 0.51
USP42-205ENST00000465073 STMN2Q93045 179 aa18.22■□□□□ 0.51
USP42-205ENST00000465073 HMG20AQ9NP66 347 aa18.22■□□□□ 0.51
USP42-205ENST00000465073 CALCBP10092 127 aa18.21■□□□□ 0.51
USP42-205ENST00000465073 PF4V1P10720 104 aa18.21■□□□□ 0.51
USP42-205ENST00000465073 POLR2IP36954 125 aaKnown RBP18.21■□□□□ 0.51
USP42-205ENST00000465073 TP53I3Q53FA7 332 aa18.21■□□□□ 0.51
USP42-205ENST00000465073 HEPN1Q6WQI6 88 aa18.21■□□□□ 0.51
USP42-205ENST00000465073 OR2G2Q8NGZ5 317 aa18.21■□□□□ 0.51
USP42-205ENST00000465073 CORO2AQ92828 525 aa18.21■□□□□ 0.51
USP42-205ENST00000465073 RNF166Q96A37 237 aaPredicted RBP18.21■□□□□ 0.51
USP42-205ENST00000465073 EME1Q96AY2 570 aa18.21■□□□□ 0.51
USP42-205ENST00000465073 FGGYQ96C11 551 aa18.21■□□□□ 0.51
USP42-205ENST00000465073 TAS2R3Q9NYW6 316 aa18.21■□□□□ 0.51
USP42-205ENST00000465073 AP4S1Q9Y587 144 aa18.21■□□□□ 0.51
USP42-205ENST00000465073 LEUTXA8MZ59 168 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 SIRPB1O00241 398 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 IGLL1P15814 213 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 ZNF20P17024 532 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 CDK2P24941 298 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 SNU13P55769 128 aaKnown RBP18.2■□□□□ 0.5
USP42-205ENST00000465073 ZNF85Q03923 595 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 PRAMEF5Q5TYX0 476 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 KCTD20Q7Z5Y7 419 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 AMIGO2Q86SJ2 522 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 SPSB1Q96BD6 273 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 GABARAPL3Q9BY60 117 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 EXOSC4Q9NPD3 245 aaKnown RBP18.2■□□□□ 0.5
USP42-205ENST00000465073 PCDHGB5Q9Y5G0 923 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 TSSC4Q9Y5U2 329 aaPredicted RBP18.2■□□□□ 0.5
USP42-205ENST00000465073 TCRBV4S1A1TA0A5B7 111 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 OR2H2O95918 312 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 IGLV1-47P01700 117 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 ISG15P05161 165 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 FCGR1AP12314 374 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 CD24P25063 80 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 TCTEX1D4Q5JR98 221 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 BCAS4Q8TDM0 211 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 CREB3L1Q96BA8 519 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 GSTK1Q9Y2Q3 226 aa18.2■□□□□ 0.5
USP42-205ENST00000465073 OCM2P0CE71 109 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 OCMP0CE72 109 aaPredicted RBP18.19■□□□□ 0.5
USP42-205ENST00000465073 LMO1P25800 156 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 CD34P28906 385 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 CEACAM3P40198 252 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 FDX2Q6P4F2 183 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 BAIAP2L2Q6UXY1 529 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 CCDC121Q6ZUS5 278 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 OPALINQ96PE5 141 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 MBOAT4Q96T53 435 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 SLC25A33Q9BSK2 321 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 RIBC2Q9H4K1 309 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 RHOFQ9HBH0 211 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 FRRS1LQ9P0K9 344 aa18.19■□□□□ 0.5
USP42-205ENST00000465073 OR2F2O95006 317 aa18.18■□□□□ 0.5
USP42-205ENST00000465073 PF4P02776 101 aa18.18■□□□□ 0.5
USP42-205ENST00000465073 LPLP06858 475 aa18.18■□□□□ 0.5
USP42-205ENST00000465073 GLIPR1P48060 266 aa18.18■□□□□ 0.5
USP42-205ENST00000465073 KPNB1Q14974 876 aaKnown RBP18.18■□□□□ 0.5
USP42-205ENST00000465073 ABCA11PQ4W5N1 156 aa18.18■□□□□ 0.5
USP42-205ENST00000465073 RBM14Q96PK6 669 aaKnown RBP18.18■□□□□ 0.5
USP42-205ENST00000465073 COMMD4Q9H0A8 199 aa18.18■□□□□ 0.5
USP42-205ENST00000465073 IGKV1-12A0A0C4DH73 117 aa18.17■□□□□ 0.5
USP42-205ENST00000465073 KDM4BO94953 1096 aa18.17■□□□□ 0.5
USP42-205ENST00000465073 IGKV1D-12P01611 117 aa18.17■□□□□ 0.5
USP42-205ENST00000465073 MT-ND2P03891 347 aa18.17■□□□□ 0.5
USP42-205ENST00000465073 PRRX1P54821 245 aa18.17■□□□□ 0.5
USP42-205ENST00000465073 SLC35A2P78381 396 aa18.17■□□□□ 0.5
USP42-205ENST00000465073 AESQ08117 197 aa18.17■□□□□ 0.5
USP42-205ENST00000465073 OR4X2Q8NGF9 303 aa18.17■□□□□ 0.5
USP42-205ENST00000465073 MYDGFQ969H8 173 aa18.17■□□□□ 0.5
USP42-205ENST00000465073 HHLA2Q9UM44 414 aa18.17■□□□□ 0.5
USP42-205ENST00000465073 ODAMA1E959 279 aa18.16■□□□□ 0.5
USP42-205ENST00000465073 M0QZK8 103 aa18.16■□□□□ 0.5
USP42-205ENST00000465073 TOR1AO14656 332 aa18.16■□□□□ 0.5
USP42-205ENST00000465073 MPIG6BO95866 241 aa18.16■□□□□ 0.5
USP42-205ENST00000465073 CSN2P05814 226 aa18.16■□□□□ 0.5
USP42-205ENST00000465073 SAXO1Q8IYX7 474 aa18.16■□□□□ 0.5
USP42-205ENST00000465073 CHST4Q8NCG5 386 aa18.16■□□□□ 0.5
USP42-205ENST00000465073 OR4D6Q8NGJ1 314 aa18.16■□□□□ 0.5
USP42-205ENST00000465073 TRUB1Q8WWH5 349 aaKnown RBP18.16■□□□□ 0.5
USP42-205ENST00000465073 RFT1Q96AA3 541 aa18.16■□□□□ 0.5
USP42-205ENST00000465073 RCC1LQ96I51 464 aaKnown RBP18.16■□□□□ 0.5
USP42-205ENST00000465073 ZNF286AQ9HBT8 521 aa18.16■□□□□ 0.5
USP42-205ENST00000465073 OOSP1A8MZH6 123 aa18.15■□□□□ 0.5
USP42-205ENST00000465073 BUB1B-PAK6H3BSN5 160 aa18.15■□□□□ 0.5
USP42-205ENST00000465073 DUS4LO95620 317 aaKnown RBP18.15■□□□□ 0.5
USP42-205ENST00000465073 ZNF44P15621 663 aa18.15■□□□□ 0.5
USP42-205ENST00000465073 GDNFP39905 211 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms