RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 PRDM13Q9H4Q3 707 aa13□□□□□ -0.33
ERCC3-206ENST00000462306 METTL8Q9H825 291 aaKnown RBP13□□□□□ -0.33
ERCC3-206ENST00000462306 EXOSC4Q9NPD3 245 aaKnown RBP13□□□□□ -0.33
ERCC3-206ENST00000462306 CKLFQ9UBR5 152 aa13□□□□□ -0.33
ERCC3-206ENST00000462306 FOXJ3Q9UPW0 622 aa13□□□□□ -0.33
ERCC3-206ENST00000462306 RNASEK-C17orf49H0YIS7 233 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 OR2H2O95918 312 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 GABRR1P24046 479 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 PRTN3P24158 256 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 MAP2K4P45985 399 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 GP2P55259 537 aaKnown RBP12.99□□□□□ -0.33
ERCC3-206ENST00000462306 TPBGQ13641 420 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 ZNF273Q14593 569 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 ACSM3Q53FZ2 586 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 Q6P435 159 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 GDPD3Q7L5L3 318 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 LYPD6Q86Y78 171 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 PDZD9Q8IXQ8 264 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 TBC1D15Q8TC07 691 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 ZFAND2BQ8WV99 257 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 THRSPQ92748 146 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 C1orf147Q96MC9 270 aaPredicted RBP12.99□□□□□ -0.33
ERCC3-206ENST00000462306 C19orf24Q9BVV8 132 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 CHST6Q9GZX3 395 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 ISYNA1Q9NPH2 558 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 NOX4Q9NPH5 578 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 GLS2Q9UI32 602 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 BLOC1S6Q9UL45 172 aa12.99□□□□□ -0.33
ERCC3-206ENST00000462306 MDFIC2A0A1B0GVS7 189 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 SIRPB1O00241 398 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 SC5DO75845 299 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 CDRT1O95170 752 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 CCL3L1P16619 93 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 EEF1B2P24534 225 aaKnown RBP12.98□□□□□ -0.33
ERCC3-206ENST00000462306 MAPK3P27361 379 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-206ENST00000462306 OR3A1P47881 315 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 BMXP51813 675 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 DLX6P56179 175 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 EDDM3BP56851 147 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 KLRD1Q13241 179 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 BLMHQ13867 455 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 TBCEQ15813 527 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-206ENST00000462306 GRK1Q15835 563 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 DEFB112Q30KQ8 113 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 LIPKQ5VXJ0 399 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 HCP5Q6MZN7 132 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 RBMS3Q6XE24 437 aaKnown RBP12.98□□□□□ -0.33
ERCC3-206ENST00000462306 PIP4P2Q8N4L2 257 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 OR51T1Q8NGJ9 327 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 OR10K1Q8NGX5 313 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 UFD1Q92890 307 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 TMED9Q9BVK6 235 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 FAM192AQ9GZU8 254 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 Q9H521 79 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 IL36GQ9NZH8 169 aa12.98□□□□□ -0.33
ERCC3-206ENST00000462306 A0A0G2JK05 382 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 A0A1W2PPH5 198 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 MGST3O14880 152 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 MAS1P04201 325 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 HSMCR30P0CW71 290 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 UBA52P62987 128 aaKnown RBP12.97□□□□□ -0.33
ERCC3-206ENST00000462306 MEF2CQ06413 473 aaPredicted RBP12.97□□□□□ -0.33
ERCC3-206ENST00000462306 MLLT11Q13015 90 aaPredicted RBP12.97□□□□□ -0.33
ERCC3-206ENST00000462306 EDDM3AQ14507 147 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 RSU1Q15404 277 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 FAM27D1Q5T7N8 215 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 TCF23Q7RTU1 214 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 CDH26Q8IXH8 852 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 TPRX1Q8N7U7 411 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.97□□□□□ -0.33
ERCC3-206ENST00000462306 CHST4Q8NCG5 386 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 MGLLQ99685 303 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 METTL9Q9H1A3 318 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 ING4Q9UNL4 249 aa12.97□□□□□ -0.33
ERCC3-206ENST00000462306 MEX3AA1L020 520 aaKnown RBP12.96□□□□□ -0.33
ERCC3-206ENST00000462306 DNAJC9-AS1A6NH13 148 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 C17orf98A8MV24 154 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 TRIM77I1YAP6 450 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 SLC33A1O00400 549 aaPredicted RBP12.96□□□□□ -0.33
ERCC3-206ENST00000462306 DEGS1O15121 323 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 HTR3BO95264 441 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 ZNF44P15621 663 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 CPEP16870 476 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 ERP29P30040 261 aaKnown RBP12.96□□□□□ -0.33
ERCC3-206ENST00000462306 UBE2E1P51965 193 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 ERVFRD-1P60508 538 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 GABARAPL2P60520 117 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 GUCA2AQ02747 115 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 SCN1BQ07699 218 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 BAMBIQ13145 260 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 IL13RA2Q14627 380 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 PIGYQ3MUY2 71 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 NCR3LG1Q68D85 454 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 SPATA3Q8NHX4 192 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 PPP1R35Q8TAP8 253 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 FAM216AQ8WUB2 273 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 DUX5Q96PT3 197 aa12.96□□□□□ -0.33
ERCC3-206ENST00000462306 NR1H4Q96RI1 486 aaPredicted RBP12.96□□□□□ -0.33
ERCC3-206ENST00000462306 PPIL3Q9H2H8 161 aaKnown RBP12.96□□□□□ -0.33
ERCC3-206ENST00000462306 ACOT13Q9NPJ3 140 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms