RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 C19orf12Q9NSK7 152 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 FGFR1OP2Q9NVK5 253 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 TAS2R3Q9NYW6 316 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 DAPK2Q9UIK4 370 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 ARL2BPQ9Y2Y0 163 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 POLR3HQ9Y535 204 aaPredicted RBP3.63□□□□□ -1.83
SDCBP-205ENST00000447267 IGHV4-4A0A075B6R2 117 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 A6NLC8 198 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF726A6NNF4 738 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 I3L521 148 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 AIM2O14862 343 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 SNX3O60493 162 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 TBX19O60806 448 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 NOL3O60936 208 aaKnown RBP3.62□□□□□ -1.83
SDCBP-205ENST00000447267 ENTPD5O75356 428 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 STX11O75558 287 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 OR4F21O95013 312 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 FARS2O95363 451 aaKnown RBP3.62□□□□□ -1.83
SDCBP-205ENST00000447267 AHSA1O95433 338 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 PTBP3O95758 552 aaKnown RBP3.62□□□□□ -1.83
SDCBP-205ENST00000447267 SHBGP04278 402 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 CDK1P06493 297 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 CD7P09564 240 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF32P17041 273 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 CXCR1P25024 350 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 S100PP25815 95 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 RPS5P46782 204 aaKnown RBP3.62□□□□□ -1.83
SDCBP-205ENST00000447267 PRRX1P54821 245 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 MFAP2P55001 183 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 OR12D2P58182 307 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 CD81P60033 236 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 PDIA2Q13087 525 aaKnown RBP3.62□□□□□ -1.83
SDCBP-205ENST00000447267 MED21Q13503 144 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 GPR50Q13585 617 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 ALKBH1Q13686 389 aaKnown RBP3.62□□□□□ -1.83
SDCBP-205ENST00000447267 APOFQ13790 326 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 ATG16L1Q676U5 607 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 C1orf94Q6P1W5 598 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 UNQ6126/PRO20091Q6UXV3 157 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 KCTD8Q6ZWB6 473 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 UEVLDQ8IX04 471 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 FAM185AQ8N0U4 392 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 STPG2Q8N412 459 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 RNF152Q8N8N0 203 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 ADPRHL1Q8NDY3 354 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 OR8J2Q8NGG1 315 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 OR9Q1Q8NGQ5 310 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 C11orf45Q8TAV5 145 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 OIT3Q8WWZ8 545 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 STMN2Q93045 179 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 TMEM106AQ96A25 262 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 AKR1E2Q96JD6 320 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 TEX37Q96LM6 180 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 EPYCQ99645 322 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 WFDC6Q9BQY6 131 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 TEX12Q9BXU0 123 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 SLC22A4Q9H015 551 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 C1orf21Q9H246 121 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 OR51V1Q9H2C8 321 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 ELOVL3Q9HB03 270 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 HEYLQ9NQ87 328 aaPredicted RBP3.62□□□□□ -1.83
SDCBP-205ENST00000447267 PCDHB16Q9NRJ7 776 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 C1orf123Q9NWV4 160 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 GLTPQ9NZD2 209 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 DNAJB9Q9UBS3 223 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 CORO2BQ9UQ03 480 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 UGT2A1Q9Y4X1 527 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 TEX264Q9Y6I9 313 aa3.62□□□□□ -1.83
SDCBP-205ENST00000447267 XKRY2A2RUG3 117 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 LEUTXA8MZ59 168 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 LOC110117498-PIK3R3F6TDL0 507 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF701M0R085 212 aaPredicted RBP3.61□□□□□ -1.83
SDCBP-205ENST00000447267 CTDSP2O14595 271 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 STX16O14662 325 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 SGCEO43556 437 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 OR2F2O95006 317 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 DIRAS3O95661 229 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 AK1P00568 194 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 IFNA10P01566 189 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 GUSBP08236 651 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 OR4E1P0C645 316 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 SMIM6P0DI80 62 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 NR2F1P10589 423 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 UMPSP11172 480 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 UQCRBP14927 111 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 GRPRP30550 384 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 OTX1P32242 354 aaPredicted RBP3.61□□□□□ -1.83
SDCBP-205ENST00000447267 GPX4P36969 197 aaPredicted RBP3.61□□□□□ -1.83
SDCBP-205ENST00000447267 CD200P41217 278 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 TGM4P49221 684 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 KRTAP10-1P60331 282 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 PITPNAQ00169 270 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 PSG4Q00888 419 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 PUDPQ08623 228 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 KIAA0141Q14154 515 aaPredicted RBP3.61□□□□□ -1.83
SDCBP-205ENST00000447267 HES1Q14469 280 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF273Q14593 569 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 LRRC10Q5BKY1 277 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 TEX36Q5VZQ5 186 aa3.61□□□□□ -1.83
SDCBP-205ENST00000447267 FAM91A1Q658Y4 838 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms