RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 AP2S1P53680 142 aaPredicted RBP17.97■□□□□ 0.47
PTPRF-207ENST00000436724 ZNF154Q13106 437 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 OR8G1Q15617 311 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 ZNF718Q3SXZ3 478 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 FAM76BQ5HYJ3 339 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 DCAF12L2Q5VW00 463 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 TMED4Q7Z7H5 227 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 CCDC28AQ8IWP9 274 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 SCCPDHQ8NBX0 429 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 OR8G5Q8NG78 346 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 PRRT1Q99946 306 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 CMSS1Q9BQ75 279 aaKnown RBP17.97■□□□□ 0.47
PTPRF-207ENST00000436724 SLC2A8Q9NY64 477 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 SDCBPO00560 298 aaPredicted RBP17.97■□□□□ 0.47
PTPRF-207ENST00000436724 CRYZL1O95825 349 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 GCH1P30793 250 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 IL24Q13007 206 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 ATPAF1Q5TC12 328 aaPredicted RBP17.97■□□□□ 0.47
PTPRF-207ENST00000436724 Q6ZR03 302 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 COMMD7Q86VX2 200 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 SLC25A21Q9BQT8 299 aaPredicted RBP17.97■□□□□ 0.47
PTPRF-207ENST00000436724 TMEM100Q9NV29 134 aa17.97■□□□□ 0.47
PTPRF-207ENST00000436724 TMEM82A0PJX8 343 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 CA11O75493 328 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 CRYAAP02489 173 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 GRPP07492 148 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 TBPP20226 339 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 FUT3P21217 361 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 MPZP25189 248 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 GMFBP60983 142 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 SEC61A1P61619 476 aaKnown RBP17.96■□□□□ 0.47
PTPRF-207ENST00000436724 LY6DQ14210 128 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 FAM209AQ5JX71 171 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 LRP11Q86VZ4 500 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 VSIG4Q9Y279 399 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 SHANK1Q9Y566 2161 aa17.96■□□□□ 0.47
PTPRF-207ENST00000436724 J3QT63 122 aa17.96■□□□□ 0.46
PTPRF-207ENST00000436724 GOSR2O14653 212 aa17.96■□□□□ 0.46
PTPRF-207ENST00000436724 CDIPTO14735 213 aa17.96■□□□□ 0.46
PTPRF-207ENST00000436724 C4BPBP20851 252 aa17.96■□□□□ 0.46
PTPRF-207ENST00000436724 NHLRC3Q5JS37 347 aa17.96■□□□□ 0.46
PTPRF-207ENST00000436724 OR5H2Q8NGV7 314 aa17.96■□□□□ 0.46
PTPRF-207ENST00000436724 PKIBQ9C010 78 aa17.96■□□□□ 0.46
PTPRF-207ENST00000436724 ZNF442Q9H7R0 627 aa17.96■□□□□ 0.46
PTPRF-207ENST00000436724 JKAMPQ9P055 326 aa17.96■□□□□ 0.46
PTPRF-207ENST00000436724 TMA7Q9Y2S6 64 aaKnown RBP17.96■□□□□ 0.46
PTPRF-207ENST00000436724 HMSDA8MTL9 139 aa17.95■□□□□ 0.46
PTPRF-207ENST00000436724 C16orf97H3BN30 126 aa17.95■□□□□ 0.46
PTPRF-207ENST00000436724 HSPB6O14558 160 aa17.95■□□□□ 0.46
PTPRF-207ENST00000436724 SNAPC5O75971 98 aa17.95■□□□□ 0.46
PTPRF-207ENST00000436724 ZNF250P15622 560 aa17.95■□□□□ 0.46
PTPRF-207ENST00000436724 KITLGP21583 273 aa17.95■□□□□ 0.46
PTPRF-207ENST00000436724 RBMXP38159 391 aaKnown RBP17.95■□□□□ 0.46
PTPRF-207ENST00000436724 MBNL2Q5VZF2 373 aaKnown RBP17.95■□□□□ 0.46
PTPRF-207ENST00000436724 VHLLQ6RSH7 139 aa17.95■□□□□ 0.46
PTPRF-207ENST00000436724 Q6ZPA2 131 aa17.95■□□□□ 0.46
PTPRF-207ENST00000436724 RND1Q92730 232 aa17.95■□□□□ 0.46
PTPRF-207ENST00000436724 DMRTA2Q96SC8 542 aa17.95■□□□□ 0.46
PTPRF-207ENST00000436724 FN3KRPQ9HA64 309 aa17.95■□□□□ 0.46
PTPRF-207ENST00000436724 DUSP13Q9UII6 198 aa17.95■□□□□ 0.46
PTPRF-207ENST00000436724 LRP5LA4QPB2 252 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 ATP6V1G2-DDX39BF2Z307 99 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 F5H5P2 479 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 RRASP10301 218 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 RAB14P61106 215 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 C4orf46Q504U0 113 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 VAX1Q5SQQ9 334 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 RGS7BPQ6MZT1 257 aaPredicted RBP17.94■□□□□ 0.46
PTPRF-207ENST00000436724 C17orf50Q8WW18 174 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 VKORC1Q9BQB6 163 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 COL6A6A6NMZ7 2263 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 RGS11O94810 467 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 FCGR3AP08637 254 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 HOXA4Q00056 320 aaPredicted RBP17.94■□□□□ 0.46
PTPRF-207ENST00000436724 MPPED2Q15777 294 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 AANATQ16613 207 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 OR5AP2Q8NGF4 316 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 PRORYQ9H606 182 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 EHFQ9NZC4 300 aa17.94■□□□□ 0.46
PTPRF-207ENST00000436724 ICE1Q9Y2F5 2266 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 OR4E1P0C645 316 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 TUBG1P23258 451 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 CHRFAM7AQ494W8 412 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 FAM58AQ8N1B3 248 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 GTF3AQ92664 365 aaKnown RBP17.93■□□□□ 0.46
PTPRF-207ENST00000436724 TUBG2Q9NRH3 451 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 ELOVL5Q9NYP7 299 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 MEMO1Q9Y316 297 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 NOP16Q9Y3C1 178 aaKnown RBP17.93■□□□□ 0.46
PTPRF-207ENST00000436724 PLCE1Q9P212 2302 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 MED19A0JLT2 244 aaPredicted RBP17.93■□□□□ 0.46
PTPRF-207ENST00000436724 I3L521 148 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 ARPC5O15511 151 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 S100A11P31949 105 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 ACTBL2Q562R1 376 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 ZNF826PQ6ZT77 177 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 TMUB2Q71RG4 321 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 MARCH1Q8TCQ1 289 aa17.93■□□□□ 0.46
PTPRF-207ENST00000436724 PKD1L2Q7Z442 2459 aa17.92■□□□□ 0.46
PTPRF-207ENST00000436724 TUBAL3A6NHL2 446 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms