RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 FAM90A8PA6NJQ4 464 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 SH2D1BO14796 132 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 MGST3O14880 152 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 OR2H2O95918 312 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 HCKP08631 526 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 IGHV1-8P0DP01 117 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 TGFBR2P37173 567 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 SOX2P48431 317 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 PROK1P58294 105 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 CDK5R1Q15078 307 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 CCDC58Q4VC31 144 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 LDLRAD2Q5SZI1 272 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 DHRS7BQ6IAN0 325 aaPredicted RBP14.36□□□□□ -0.11
LSM5-204ENST00000409909 RPL22L1Q6P5R6 122 aaKnown RBP14.36□□□□□ -0.11
LSM5-204ENST00000409909 DYNAPQ8N1N2 210 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 DHRSXQ8N5I4 330 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 PIFOQ8TCI5 191 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 HAVCR2Q8TDQ0 301 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 ZNF714Q96N38 554 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 C16orf95Q9H693 158 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 NEK6Q9HC98 313 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 C8orf4Q9NR00 106 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 GLS2Q9UI32 602 aa14.36□□□□□ -0.11
LSM5-204ENST00000409909 DIMT1Q9UNQ2 313 aaKnown RBP14.36□□□□□ -0.11
LSM5-204ENST00000409909 KIAA2026Q5HYC2 2103 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 MEGF11A6BM72 1044 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 ODF3BA8MYP8 253 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 TSPAN9O75954 239 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 LALBAP00709 142 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 GNAO1P09471 354 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 TMEM225BP0DP42 221 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 LMO1P25800 156 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 LGALS4P56470 323 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 LY6EQ16553 131 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 AANATQ16613 207 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 LRRC75BQ2VPJ9 315 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 LAIR2Q6ISS4 152 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 Q6P435 159 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 TMPRSS11AQ6ZMR5 421 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 OR11H6Q8NGC7 330 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 OR51A2Q8NGJ7 313 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 PPP1R35Q8TAP8 253 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 CITED1Q99966 193 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 PPA2Q9H2U2 334 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 RHOFQ9HBH0 211 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 EXOSC4Q9NPD3 245 aaKnown RBP14.35□□□□□ -0.11
LSM5-204ENST00000409909 BABAM2Q9NXR7 383 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 LINC00312Q9Y6C7 94 aa14.35□□□□□ -0.11
LSM5-204ENST00000409909 A0A0G2JK05 382 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 OGG1O15527 345 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 CLPXO76031 633 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 ARG1P05089 322 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 ERP29P30040 261 aaKnown RBP14.34□□□□□ -0.11
LSM5-204ENST00000409909 P2RX3P56373 397 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 SCN1BQ07699 218 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 OGFRL1Q5TC84 451 aaPredicted RBP14.34□□□□□ -0.11
LSM5-204ENST00000409909 SLC35E4Q6ICL7 350 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 SETD9Q8NE22 299 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 OR13D1Q8NGV5 346 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 GPR148Q8TDV2 347 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 GGHQ92820 318 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 TAS2R4Q9NYW5 299 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 WNK1Q9H4A3 2382 aa14.34□□□□□ -0.11
LSM5-204ENST00000409909 IRGMA1A4Y4 181 aa14.33□□□□□ -0.12
LSM5-204ENST00000409909 CASQ2O14958 399 aaPredicted RBP14.33□□□□□ -0.12
LSM5-204ENST00000409909 MMP23AO75900 390 aa14.33□□□□□ -0.12
LSM5-204ENST00000409909 RAB3AP20336 220 aa14.33□□□□□ -0.12
LSM5-204ENST00000409909 AESQ08117 197 aa14.33□□□□□ -0.12
LSM5-204ENST00000409909 ZNF626Q68DY1 528 aa14.33□□□□□ -0.12
LSM5-204ENST00000409909 ZNF485Q8NCK3 441 aa14.33□□□□□ -0.12
LSM5-204ENST00000409909 TMEM80Q96HE8 168 aa14.33□□□□□ -0.12
LSM5-204ENST00000409909 NKX3-1Q99801 234 aaPredicted RBP14.33□□□□□ -0.12
LSM5-204ENST00000409909 EXOSC1Q9Y3B2 195 aaKnown RBP14.33□□□□□ -0.12
LSM5-204ENST00000409909 VGLL3A8MV65 326 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 SLC33A1O00400 549 aaPredicted RBP14.32□□□□□ -0.12
LSM5-204ENST00000409909 GABRPO00591 440 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 ZNF44P15621 663 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 MYL12AP19105 171 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 CAPGP40121 348 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 GLIPR1P48060 266 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 RAB13P51153 203 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 ST3GAL4Q11206 333 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 PLA1AQ53H76 456 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 ELP2Q6IA86 826 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 BRICD5Q6PL45 260 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 BAIAP2L2Q6UXY1 529 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 SATL1Q86VE3 508 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 OR13C5Q8NGS8 318 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 TMEM106AQ96A25 262 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 ORAI1Q96D31 301 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 MALSU1Q96EH3 234 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 COQ2Q96H96 371 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 UBE2J1Q9Y385 318 aaPredicted RBP14.32□□□□□ -0.12
LSM5-204ENST00000409909 TBL2Q9Y4P3 447 aaKnown RBP14.32□□□□□ -0.12
LSM5-204ENST00000409909 PCDHGB5Q9Y5G0 923 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 SESN1Q9Y6P5 492 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 HSPE1-MOB4S4R3N1 261 aa14.32□□□□□ -0.12
LSM5-204ENST00000409909 DEGS1O15121 323 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 CHST1O43916 411 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 MTNR1BP49286 362 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms