RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 FUOMA2VDF0 154 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 FOXI3A8MTJ6 420 aaPredicted RBP11.53□□□□□ -0.56
VAPB-202ENST00000395802 MCRIP1C9JLW8 97 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 F8VVB4 439 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 F8VWA3 439 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 H7C417 338 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 MFNGO00587 321 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 ORC5O43913 435 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 CLDN1O95832 211 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 ZNF44P15621 663 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 MUC1P15941 1255 aaPredicted RBP11.53□□□□□ -0.56
VAPB-202ENST00000395802 GDNFP39905 211 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 TMEM50BP56557 158 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 KCNJ8Q15842 424 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 PLAC9Q5JTB6 97 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 C11orf71Q6IPW1 123 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 TOMM5Q8N4H5 51 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 GCSAMQ8N6F7 178 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 PECRQ9BY49 303 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 TMEM235A6NFC5 223 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 CENPXA8MT69 81 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 H7C1Q1 480 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 SOD3P08294 240 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 CHATP28329 748 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 KLF9Q13886 244 aaPredicted RBP11.53□□□□□ -0.56
VAPB-202ENST00000395802 BATF2Q8N1L9 274 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 ZCCHC24Q8N2G6 241 aaKnown RBP11.53□□□□□ -0.56
VAPB-202ENST00000395802 PPP1R35Q8TAP8 253 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 CACNG6Q9BXT2 260 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 RIMS4Q9H426 269 aaPredicted RBP11.53□□□□□ -0.56
VAPB-202ENST00000395802 ZMAT3Q9HA38 289 aaKnown RBP11.53□□□□□ -0.56
VAPB-202ENST00000395802 TMEM106BQ9NUM4 274 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 RCC2Q9P258 522 aaKnown RBP11.53□□□□□ -0.56
VAPB-202ENST00000395802 NLKQ9UBE8 527 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 KLK11Q9UBX7 282 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 ZNF107Q9UII5 783 aaPredicted RBP11.53□□□□□ -0.56
VAPB-202ENST00000395802 CACNG2Q9Y698 323 aa11.53□□□□□ -0.56
VAPB-202ENST00000395802 TRAV38-1A0A0B4J264 116 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 A1L4Q6 167 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 POM121CA8CG34 1229 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 HAND1O96004 215 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 CD8AP01732 235 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 CSF1P09603 554 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 BTCP35070 178 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 MDH2P40926 338 aaKnown RBP11.52□□□□□ -0.57
VAPB-202ENST00000395802 KCNJ3P48549 501 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 BCAP31P51572 246 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 SNU13P55769 128 aaKnown RBP11.52□□□□□ -0.57
VAPB-202ENST00000395802 GMFBP60983 142 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 MZT2BQ6NZ67 158 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 C6orf201Q7Z4U5 140 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 PEG10Q86TG7 708 aaKnown RBP11.52□□□□□ -0.57
VAPB-202ENST00000395802 DUSP18Q8NEJ0 188 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 ENKURQ8TC29 256 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 GPX8Q8TED1 209 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 ST8SIA4Q92187 359 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 CCL17Q92583 94 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 TREM2Q9NZC2 230 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 MTFP1Q9UDX5 166 aa11.52□□□□□ -0.57
VAPB-202ENST00000395802 OR2AT4A6NND4 320 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 LMO1P25800 156 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 SLC6A1P30531 599 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 FAUP35544 74 aaKnown RBP11.51□□□□□ -0.57
VAPB-202ENST00000395802 DYRK1AQ13627 763 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 SIGIRRQ6IA17 410 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 NEK7Q8TDX7 302 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 RDH5Q92781 318 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 SEH1LQ96EE3 360 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 C14orf79Q96F83 325 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 WDR13Q9H1Z4 485 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 IFT46Q9NQC8 304 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 OR14J1Q9UGF5 321 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 EDARQ9UNE0 448 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 WIPI2Q9Y4P8 454 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 A0A1W2PPR1 153 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 OOEPA6NGQ2 149 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 FSTL3O95633 263 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 OR2H2O95918 312 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 SHEQ5VZ18 495 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 TEX36Q5VZQ5 186 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 TRAPPC6BQ86SZ2 158 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 CADM3Q8N126 398 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 BOLLQ8N9W6 283 aaKnown RBP11.51□□□□□ -0.57
VAPB-202ENST00000395802 CMSS1Q9BQ75 279 aaKnown RBP11.51□□□□□ -0.57
VAPB-202ENST00000395802 C7orf50Q9BRJ6 194 aaKnown RBP11.51□□□□□ -0.57
VAPB-202ENST00000395802 FAAP24Q9BTP7 215 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 DPCDQ9BVM2 203 aaPredicted RBP11.51□□□□□ -0.57
VAPB-202ENST00000395802 CHST6Q9GZX3 395 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 DNTTIP1Q9H147 329 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 MMP28Q9H239 520 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 PLEKHF2Q9H8W4 249 aa11.51□□□□□ -0.57
VAPB-202ENST00000395802 ARFGEF3Q5TH69 2177 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 PPIAL4EA0A075B759 164 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 FAM240BA0A1B0GVZ2 78 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 ANKRD20A5PA0PJZ0 165 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 RFPL4AA6NLU0 287 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 PPIAL4DF5H284 164 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 RFPL4AL1F8VTS6 287 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 TMEM178BH3BS89 294 aa11.5□□□□□ -0.57
VAPB-202ENST00000395802 WNT9BO14905 357 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms