RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 OXA1LQ15070 435 aa13.12□□□□□ -0.31
LRRK1-201ENST00000388948 ZNF239Q16600 458 aaKnown RBP13.12□□□□□ -0.31
LRRK1-201ENST00000388948 OR5AP2Q8NGF4 316 aa13.12□□□□□ -0.31
LRRK1-201ENST00000388948 OR4C16Q8NGL9 310 aa13.12□□□□□ -0.31
LRRK1-201ENST00000388948 RXFP4Q8TDU9 374 aa13.12□□□□□ -0.31
LRRK1-201ENST00000388948 TCRBV16S1A1N1A0A5B0 115 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 VDAC1P21796 283 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 HOXC8P31273 242 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 RPL31P62899 125 aaKnown RBP13.11□□□□□ -0.31
LRRK1-201ENST00000388948 Q1RN00 199 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 WDR34Q96EX3 536 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 KLK11Q9UBX7 282 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 OR2C1O95371 312 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 FOSL1P15407 271 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 HIST1H1DP16402 221 aaKnown RBP13.11□□□□□ -0.31
LRRK1-201ENST00000388948 BTG1P62324 171 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 ETFDHQ16134 617 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 TMEM128Q5BJH2 165 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 FAM103A1Q9BTL3 118 aaKnown RBP13.11□□□□□ -0.31
LRRK1-201ENST00000388948 CA10Q9NS85 328 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 G3V3Q6 166 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 TBX19O60806 448 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 SLC7A5P1Q8MH63 180 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 UMAD1C9J7I0 102 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 DNPH1O43598 174 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 C1QL3Q5VWW1 255 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 FAHD1Q6P587 224 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 ZNF705AQ6ZN79 300 aaPredicted RBP13.11□□□□□ -0.31
LRRK1-201ENST00000388948 ARRDC1Q8N5I2 433 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 TMEM251Q8N6I4 163 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 MOSPD3O75425 235 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 ACP1P24666 158 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 ZNF501Q96CX3 271 aaPredicted RBP13.11□□□□□ -0.31
LRRK1-201ENST00000388948 OR2H1Q9GZK4 316 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 CSRP2Q16527 193 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 HILPDAQ9Y5L2 63 aa13.11□□□□□ -0.31
LRRK1-201ENST00000388948 LSM6P62312 80 aaKnown RBP13.1□□□□□ -0.31
LRRK1-201ENST00000388948 CLEC12BQ2HXU8 276 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 TMEM229BQ8NBD8 167 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 ZNF485Q8NCK3 441 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 ARL2-SNX15V9GYD0 113 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 CELA2AP08217 269 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 CD80P33681 288 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 ZNF275Q9NSD4 429 aaPredicted RBP13.1□□□□□ -0.31
LRRK1-201ENST00000388948 SLC6A13Q9NSD5 602 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 CES1P1Q9UKY3 287 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 TCRBV5S2A0A599 114 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 PRR33A8MZF0 331 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 ERVFRD-1P60508 538 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 SLC22A18ASQ8N1D0 253 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 CACNG5Q9UF02 275 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 UFC1Q9Y3C8 167 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 CTSSP25774 331 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 FAM214BQ7L5A3 538 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 FLYWCH2Q96CP2 140 aaKnown RBP13.1□□□□□ -0.31
LRRK1-201ENST00000388948 OR2J1Q9GZK6 312 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 RAB5AP20339 215 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 BCL3P20749 454 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 FABP9Q0Z7S8 132 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 ZNF528Q3MIS6 628 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 SLC25A45Q8N413 288 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 NPAP1Q9NZP6 1156 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 LPAR3Q9UBY5 353 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 GZMHP20718 246 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 SSBP1Q04837 148 aaKnown RBP13.1□□□□□ -0.31
LRRK1-201ENST00000388948 SLC23A3Q6PIS1 610 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 SAP25Q8TEE9 199 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 PIGMQ9H3S5 423 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 ZMIZ1Q9ULJ6 1067 aa13.1□□□□□ -0.31
LRRK1-201ENST00000388948 LOC102723971A0A1B0GUV8 181 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 GYPAP02724 150 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 LOXL3P58215 753 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 OR8I2Q8N0Y5 310 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 Q8WTZ3 238 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 PSG6Q00889 435 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 LYSMD2Q8IV50 215 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 TMEM272A0A1B0GTI8 110 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 SLC16A12Q6ZSM3 486 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 LRRTM1Q86UE6 522 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 C9orf40Q8IXQ3 194 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 OIT3Q8WWZ8 545 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 HARBI1Q96MB7 349 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 RREB1Q92766 1687 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 KIAA1551Q9HCM1 1747 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 JUNBP17275 347 aaPredicted RBP13.09□□□□□ -0.31
LRRK1-201ENST00000388948 SCARB1Q8WTV0 552 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 MAP6Q96JE9 813 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 P2RX4Q99571 388 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 WDR13Q9H1Z4 485 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 ABCA7Q8IZY2 2146 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 IGHV1-45A0A0A0MS14 117 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 C3orf85A0A1B0GTC6 90 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 P2RY6Q15077 328 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 ATP1A1-AS1Q5TC04 95 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 VSIG4Q9Y279 399 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 PF4V1P10720 104 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 FA2HQ7L5A8 372 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 SHISA5Q8N114 240 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 PARP11Q9NR21 331 aa13.09□□□□□ -0.31
LRRK1-201ENST00000388948 TMEM38BQ9NVV0 291 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms