RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 REEP6Q96HR9 211 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 C18orf12Q96KH6 178 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 NAA60Q9H7X0 242 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 MMP17Q9ULZ9 603 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 MKI67P46013 3256 aaKnown RBP12.77□□□□□ -0.36
TOP3B-201ENST00000357179 ZNF732B4DXR9 585 aa12.77□□□□□ -0.36
TOP3B-201ENST00000357179 HSPA12AO43301 675 aa12.77□□□□□ -0.36
TOP3B-201ENST00000357179 HBE1P02100 147 aa12.77□□□□□ -0.36
TOP3B-201ENST00000357179 GFERP55789 205 aa12.77□□□□□ -0.36
TOP3B-201ENST00000357179 MAML2Q8IZL2 1156 aaPredicted RBP12.77□□□□□ -0.36
TOP3B-201ENST00000357179 OR2C3Q8N628 320 aa12.77□□□□□ -0.36
TOP3B-201ENST00000357179 ZNF784Q8NCA9 323 aaPredicted RBP12.77□□□□□ -0.36
TOP3B-201ENST00000357179 OR51T1Q8NGJ9 327 aa12.77□□□□□ -0.36
TOP3B-201ENST00000357179 ZNF385AQ96PM9 386 aaKnown RBP12.77□□□□□ -0.36
TOP3B-201ENST00000357179 PECRQ9BY49 303 aa12.77□□□□□ -0.36
TOP3B-201ENST00000357179 ANGPTL4Q9BY76 406 aa12.77□□□□□ -0.36
TOP3B-201ENST00000357179 VN1R1Q9GZP7 353 aa12.77□□□□□ -0.36
TOP3B-201ENST00000357179 C11orf1Q9H5F2 150 aa12.77□□□□□ -0.36
TOP3B-201ENST00000357179 SDF2L1Q9HCN8 221 aa12.77□□□□□ -0.36
TOP3B-201ENST00000357179 ANKUB1A6NFN9 424 aa12.77□□□□□ -0.37
TOP3B-201ENST00000357179 SERPINE3A8MV23 424 aa12.77□□□□□ -0.37
TOP3B-201ENST00000357179 CST2P09228 141 aa12.77□□□□□ -0.37
TOP3B-201ENST00000357179 CCKARP32238 428 aa12.77□□□□□ -0.37
TOP3B-201ENST00000357179 ALDH3B1P43353 468 aa12.77□□□□□ -0.37
TOP3B-201ENST00000357179 GNG10P50151 68 aa12.77□□□□□ -0.37
TOP3B-201ENST00000357179 P2RY6Q15077 328 aa12.77□□□□□ -0.37
TOP3B-201ENST00000357179 RIMS4Q9H426 269 aaPredicted RBP12.77□□□□□ -0.37
TOP3B-201ENST00000357179 CALHM2Q9HA72 323 aa12.77□□□□□ -0.37
TOP3B-201ENST00000357179 CHST11Q9NPF2 352 aa12.77□□□□□ -0.37
TOP3B-201ENST00000357179 ASCL3Q9NQ33 180 aa12.77□□□□□ -0.37
TOP3B-201ENST00000357179 P4HTMQ9NXG6 502 aa12.77□□□□□ -0.37
TOP3B-201ENST00000357179 SEMA5BQ9P283 1151 aa12.77□□□□□ -0.37
TOP3B-201ENST00000357179 RAB11AP62491 216 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 GNMTQ14749 295 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 P4HA3Q7Z4N8 544 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 OR10S1Q8NGN2 331 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-201ENST00000357179 PHF3Q92576 2039 aaKnown RBP12.76□□□□□ -0.37
TOP3B-201ENST00000357179 USP34Q70CQ2 3546 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 FAM24AA6NFZ4 105 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 BLVRBP30043 206 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-201ENST00000357179 EFNA3P52797 238 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 SUMO3P55854 103 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-201ENST00000357179 POU3F1Q03052 451 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-201ENST00000357179 TLE4Q04727 773 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 PMS2P11Q13670 270 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 LIAT1Q6ZQX7 453 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 WDFY1Q8IWB7 410 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 OR4D5Q8NGN0 318 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 TMEM171Q8WVE6 324 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 GPR173Q9NS66 373 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 ZNF701Q9NV72 531 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-201ENST00000357179 POLR3KQ9Y2Y1 108 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-201ENST00000357179 C5orf42Q9H799 3197 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 CHD9Q3L8U1 2897 aa12.76□□□□□ -0.37
TOP3B-201ENST00000357179 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 PPP5D1E7EU14 171 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 TLE3Q04726 772 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 NSDHLQ15738 373 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 ARSJQ5FYB0 599 aaPredicted RBP12.75□□□□□ -0.37
TOP3B-201ENST00000357179 C1orf189Q5VU69 101 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 NCR3LG1Q68D85 454 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 BTNL3Q6UXE8 466 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 TGIF2LYQ8IUE0 185 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 FAM185AQ8N0U4 392 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 OR51E1Q8TCB6 317 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 GNPNAT1Q96EK6 184 aaPredicted RBP12.75□□□□□ -0.37
TOP3B-201ENST00000357179 GAB2Q9UQC2 676 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 A0A1W2PPC4 97 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 IGSF23A1L1A6 192 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 FAM221AA4D161 298 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 CA11O75493 328 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 PFN1P07737 140 aaKnown RBP12.75□□□□□ -0.37
TOP3B-201ENST00000357179 RPL29P47914 159 aaKnown RBP12.75□□□□□ -0.37
TOP3B-201ENST00000357179 CLN3Q13286 438 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 EIF3IQ13347 325 aaKnown RBP12.75□□□□□ -0.37
TOP3B-201ENST00000357179 ARL6IP1Q15041 203 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 DMRTA1Q5VZB9 504 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 MRPL41Q8IXM3 137 aaKnown RBP12.75□□□□□ -0.37
TOP3B-201ENST00000357179 OR2AJ1Q8NGZ0 328 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 SSC4DQ8WTU2 575 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 RTN4IP1Q8WWV3 396 aaPredicted RBP12.75□□□□□ -0.37
TOP3B-201ENST00000357179 LIME1Q9H400 295 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 SLC7A11Q9UPY5 501 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 F5P12259 2224 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 TRAV1-1A0A0B4J248 108 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 A0A1W2PNV4 684 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 ATXN8OSP0DMR3 200 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 DPPA3Q6W0C5 159 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 ZNF66Q6ZN08 573 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 C17orf82Q86X59 251 aaPredicted RBP12.75□□□□□ -0.37
TOP3B-201ENST00000357179 TMEM170AQ8WVE7 144 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 DDIT4LQ96D03 193 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 MSI2Q96DH6 328 aaKnown RBP12.75□□□□□ -0.37
TOP3B-201ENST00000357179 MED29Q9NX70 200 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 LRFN1Q9P244 771 aa12.75□□□□□ -0.37
TOP3B-201ENST00000357179 PCNX3Q9H6A9 2034 aa12.74□□□□□ -0.37
TOP3B-201ENST00000357179 CEACAM1P13688 526 aa12.74□□□□□ -0.37
TOP3B-201ENST00000357179 LBX1P52954 281 aa12.74□□□□□ -0.37
TOP3B-201ENST00000357179 COTL1Q14019 142 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms