RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 GCNT2Q8N0V5 402 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 C17orf78Q8N4C9 275 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 RDH5Q92781 318 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 GPR87Q9BY21 358 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 PIGMQ9H3S5 423 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 HSF4Q9ULV5 492 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 A0A1B0GV50 99 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 ACTL6AO96019 429 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 PRR18Q8N4B5 295 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 CNTNAP3BQ96NU0 1288 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 C1QTNF5Q9BXJ0 243 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 CNTNAP3Q9BZ76 1288 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 FAM117AQ9C073 453 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 NAA60Q9H7X0 242 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 FBXL17Q9UF56 701 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 ZNF391Q9UJN7 358 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 F8W036 122 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 SYNGR1O43759 233 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 LILRA1O75019 489 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 PRKACAP17612 351 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 DTYMKP23919 212 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 ID4P47928 161 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 BLOC1S1P78537 153 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 ZNF169Q14929 603 aaPredicted RBP9.94□□□□□ -0.82
PTPN2-201ENST00000309660 SLC10A1Q14973 349 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 Q6ZSR3 168 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 ZDHHC23Q8IYP9 409 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 UBALD1Q8TB05 177 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 ARL11Q969Q4 196 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 SPRY4Q9C004 299 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 PCDHB16Q9NRJ7 776 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 CFAP47Q6ZTR5 3102 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 TRBV6-7A0A0A0MS04 114 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 MED19A0JLT2 244 aaPredicted RBP9.94□□□□□ -0.82
PTPN2-201ENST00000309660 C21orf140B9A014 251 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 TRAPPC2LH3BP13 241 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 TNFSF12O43508 249 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 SP1P08047 785 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 ZNF883P0CG24 379 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 SPEM2Q0P670 501 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 OR2T2Q6IF00 324 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 FBXW12Q6X9E4 464 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 DBX2Q6ZNG2 339 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 PRRX2Q99811 253 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 BOD1L1Q8NFC6 3051 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 FAM74A7A6NL05 159 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 HKR1P10072 659 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 APLNRP35414 380 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 TMEM33P57088 247 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 TAGLNQ01995 201 aaKnown RBP9.94□□□□□ -0.82
PTPN2-201ENST00000309660 CLN3Q13286 438 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 FAM74A3Q4VXF1 159 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 HPSE2Q8WWQ2 592 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 APOBEC3DQ96AK3 386 aaPredicted RBP9.94□□□□□ -0.82
PTPN2-201ENST00000309660 SLC5A7Q9GZV3 580 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 PRDM14Q9GZV8 571 aa9.94□□□□□ -0.82
PTPN2-201ENST00000309660 DSPP15924 2871 aaKnown RBP9.93□□□□□ -0.82
PTPN2-201ENST00000309660 TRAV39A0A0B4J263 110 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 KLRC4-KLRK1H3BQV0 150 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 ABCD4O14678 606 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 RRP8O43159 456 aaKnown RBP9.93□□□□□ -0.82
PTPN2-201ENST00000309660 CA11O75493 328 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 SCTP09683 121 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 ECI1P42126 302 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 TMEM268Q5VZI3 342 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 ALKBH2Q6NS38 261 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 Q6ZPA2 131 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 MKXQ8IYA7 352 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 ZNF565Q8N9K5 539 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 SLC30A7Q8NEW0 376 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 OR52M1Q8NGK5 317 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 IL1F10Q8WWZ1 152 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 TMEM45BQ96B21 275 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 AQP10Q96PS8 301 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 SYT3Q9BQG1 590 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 UBE2J1Q9Y385 318 aaPredicted RBP9.93□□□□□ -0.82
PTPN2-201ENST00000309660 MRPS18CQ9Y3D5 142 aaKnown RBP9.93□□□□□ -0.82
PTPN2-201ENST00000309660 CD300LBA8K4G0 201 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 PPYP01298 95 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 CD46P15529 392 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 CA6P23280 308 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 GUCA2BQ16661 112 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 NSUN5P2Q63ZY6 315 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 REPIN1Q9BWE0 567 aaKnown RBP9.93□□□□□ -0.82
PTPN2-201ENST00000309660 FGF23Q9GZV9 251 aaPredicted RBP9.93□□□□□ -0.82
PTPN2-201ENST00000309660 MTCH1Q9NZJ7 389 aa9.93□□□□□ -0.82
PTPN2-201ENST00000309660 KLF13Q9Y2Y9 288 aaPredicted RBP9.93□□□□□ -0.82
PTPN2-201ENST00000309660 LINC01387J3KSC0 135 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 HSD17B6O14756 317 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 MBPP02686 304 aaPredicted RBP9.92□□□□□ -0.82
PTPN2-201ENST00000309660 OMGP23515 440 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 SWI5Q1ZZU3 235 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 ZNF528Q3MIS6 628 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 P4HA3Q7Z4N8 544 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 EIF4E3Q8N5X7 224 aaKnown RBP9.92□□□□□ -0.82
PTPN2-201ENST00000309660 STOML3Q8TAV4 291 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 ERGIC1Q969X5 290 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 BSCL2Q96G97 398 aaPredicted RBP9.92□□□□□ -0.82
PTPN2-201ENST00000309660 FER1L6-AS2Q96M78 137 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 DNTTIP1Q9H147 329 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms