RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 LOC390937A0A1W2PQ73 354 aa11.6□□□□□ -0.55
TNFRSF21-201ENST00000296861 ZNF154Q13106 437 aa11.6□□□□□ -0.55
TNFRSF21-201ENST00000296861 PNLIPRP3Q17RR3 467 aa11.6□□□□□ -0.55
TNFRSF21-201ENST00000296861 PLPPR2Q96GM1 343 aa11.6□□□□□ -0.55
TNFRSF21-201ENST00000296861 RHOVQ96L33 236 aa11.6□□□□□ -0.55
TNFRSF21-201ENST00000296861 TOLLIPQ9H0E2 274 aa11.6□□□□□ -0.55
TNFRSF21-201ENST00000296861 NAA60Q9H7X0 242 aa11.6□□□□□ -0.55
TNFRSF21-201ENST00000296861 WFDC1Q9HC57 220 aa11.6□□□□□ -0.55
TNFRSF21-201ENST00000296861 C19orf25Q9UFG5 118 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF21-201ENST00000296861 DEDDO75618 318 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 NPBWR2P48146 333 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 LRP11Q86VZ4 500 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 ZNF488Q96MN9 340 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 AP4M1O00189 453 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 CLN5O75503 358 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 SPEM2Q0P670 501 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 SPATA46Q5T0L3 261 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 CMTM1Q8IZ96 169 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 MOB1AQ9H8S9 216 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 CALHM2Q9HA72 323 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 A0A0U1RQK1 487 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 ZNF705GA8MUZ8 300 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 EIF1BO60739 113 aaKnown RBP11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 TK1P04183 234 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 SERPINE2P07093 398 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 MMP9P14780 707 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 EIF1P41567 113 aaKnown RBP11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 NKX6-1P78426 367 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 WIPI1Q5MNZ9 446 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 HIST2H3PS2Q5TEC6 136 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 OR8G2PQ6IF36 304 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 D2HGDHQ8N465 521 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 OR1J1Q8NGS3 322 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 SHDQ96IW2 340 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 HIST1H2AAQ96QV6 131 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 LIME1Q9H400 295 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 PLA2G2EQ9NZK7 142 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 DNAJB11Q9UBS4 358 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 CACFD1Q9UGQ2 172 aa11.59□□□□□ -0.55
TNFRSF21-201ENST00000296861 C5orf52A6NGY3 159 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 MSTNO14793 375 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 SCAF4O95104 1147 aaKnown RBP11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 ATP6V0CP27449 155 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 RAB5CP51148 216 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 GPM6AP51674 278 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 MPV17LQ2QL34 196 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 SMIM8Q96KF7 97 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 OCSTAMPQ9BR26 566 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 SLC35B3Q9H1N7 401 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 OR51M1Q9H341 326 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 PMS2P1A4D2B8 440 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 SRSF4Q08170 494 aaKnown RBP11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 HMGN3Q15651 99 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 ZNF468Q5VIY5 522 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 NSUN5P2Q63ZY6 315 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 SYT13Q7L8C5 426 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 OSR2Q8N2R0 312 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 OR2C3Q8N628 320 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 UBAC2Q8NBM4 344 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 NBEAQ8NFP9 2946 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 OR2M3Q8NG83 312 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 OR6X1Q8NH79 312 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 IL36RNQ9UBH0 155 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 HSF4Q9ULV5 492 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 DBX1A6NMT0 343 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 HOXB1P14653 301 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 FABP4P15090 132 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 CARD18P57730 90 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 NXPH1P58417 271 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 LTC4SQ16873 150 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 LURAP1LQ8IV03 231 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 CYB561D1Q8N8Q1 229 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 OR10AD1Q8NGE0 317 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 OR1K1Q8NGR3 316 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 TP53RKQ96S44 253 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 UBE2ZQ9H832 354 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 PPP1R3CQ9UQK1 317 aa11.58□□□□□ -0.56
TNFRSF21-201ENST00000296861 C9J4A7 227 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 WDR1O75083 606 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 CCL4P13236 92 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 ALDH3B1P43353 468 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 CNN3Q15417 329 aaKnown RBP11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 CCDC71LQ8N9Z2 235 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 SCGB1C1Q8TD33 95 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 CCDC74BQ96LY2 380 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 C1orf147Q96MC9 270 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 NIPSNAP3BQ9BS92 247 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 MRPL13Q9BYD1 178 aaKnown RBP11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 PLK3Q9H4B4 646 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 PLEKHA2Q9HB19 425 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 PARP11Q9NR21 331 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 SLC7A10Q9NS82 523 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 FCGR3AP08637 254 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 GDF1P27539 372 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 EWSR1Q01844 656 aaKnown RBP eCLIP11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 SLC25A47Q6Q0C1 308 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 ZNF611Q8N823 705 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 BCO1Q9HAY6 547 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 A0A0J9YW62 118 aa11.57□□□□□ -0.56
TNFRSF21-201ENST00000296861 CEBPZOSA8MTT3 80 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms