RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CACNG2Q9Y698 323 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 IGHV1-69-2A0A0G2JMI3 117 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 CYB5R3P00387 301 aaPredicted RBP15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 HIST1H1DP16402 221 aaKnown RBP15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 PDCD1Q15116 288 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 MPV17LQ2QL34 196 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 NRARPQ7Z6K4 114 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM90A1Q86YD7 464 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 CCL17Q92583 94 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 ARHGAP5-AS1Q96IT6 56 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 CYYR1Q96J86 154 aa15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.9■□□□□ 0.14
PDLIM3-202ENST00000284770 IFNL4K9M1U5 179 aa15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 OVOL3O00110 214 aa15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 MFNGO00587 321 aa15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 LYRM1O43325 122 aa15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 OR7C1O76099 320 aaPredicted RBP15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 LPLP06858 475 aa15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 GSTP1P09211 210 aaKnown RBP15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 SPNP16150 400 aa15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 DUSP1P28562 367 aa15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 C1orf87Q8N0U7 546 aa15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 BOLLQ8N9W6 283 aaKnown RBP15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 IGFBPL1Q8WX77 278 aa15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 TMEM106BQ9NUM4 274 aa15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 ZNF581Q9P0T4 197 aa15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 LRBAP50851 2863 aa15.89■□□□□ 0.13
PDLIM3-202ENST00000284770 ANKRD20A5PA0PJZ0 165 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 H3BUI4 141 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 KNG1P01042 644 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 CDKN1AP38936 164 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 IKZF1Q13422 519 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 HFEQ30201 348 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 OLFML2AQ68BL7 652 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 NEDD4LQ96PU5 975 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 IFT22Q9H7X7 185 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 PLEKHJ1Q9NW61 149 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 DCAF16Q9NXF7 216 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 HSF4Q9ULV5 492 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 DCHS2Q6V1P9 2916 aa15.88■□□□□ 0.13
PDLIM3-202ENST00000284770 TMEM178BH3BS89 294 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 RBBP9O75884 186 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 FUT3P21217 361 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 CHATP28329 748 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 SSBP1Q04837 148 aaKnown RBP15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 DYRK1AQ13627 763 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 ARL6IP1Q15041 203 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 ST8SIA4Q92187 359 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 PECRQ9BY49 303 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 NLKQ9UBE8 527 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 DNAJB11Q9UBS4 358 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 GLS2Q9UI32 602 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 MEIS3P1A6NDR6 274 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 SH2D1BO14796 132 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 PDCD6O75340 191 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 ECDO95905 644 aaPredicted RBP15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 COL8A2P25067 703 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 MRPS11P82912 194 aaKnown RBP15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 NKAPLQ5M9Q1 402 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 FAM201AQ5SY85 155 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 SFRP4Q6FHJ7 346 aaPredicted RBP15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 Q6P435 159 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 C6orf201Q7Z4U5 140 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 COX4I2Q96KJ9 171 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 SPACA1Q9HBV2 294 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 RCC2Q9P258 522 aaKnown RBP15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 PLEKHA6Q9Y2H5 1048 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 DYSFO75923 2080 aa15.87■□□□□ 0.13
PDLIM3-202ENST00000284770 DEGS1O15121 323 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 SSX5O60225 188 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 SSTR2P30874 369 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 BTCP35070 178 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 PNLIPRP3Q17RR3 467 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 MICBQ29980 383 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 ATAD3CQ5T2N8 411 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 MZT2BQ6NZ67 158 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 CCBE1Q6UXH8 406 aaPredicted RBP15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 NUDCD2Q8WVJ2 157 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 RDH5Q92781 318 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 CCL19Q99731 98 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 DLL4Q9NR61 685 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 OR14J1Q9UGF5 321 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 WIPI2Q9Y4P8 454 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 DSCAMO60469 2012 aa15.86■□□□□ 0.13
PDLIM3-202ENST00000284770 RFPL4AA6NLU0 287 aa15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 OR2AT4A6NND4 320 aa15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 RFPL4AL1F8VTS6 287 aa15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 OR2H2O95918 312 aa15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 HAND1O96004 215 aa15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 F12P00748 615 aaPredicted RBP15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 GSTT2BP0CG30 244 aa15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 PSG2P11465 335 aa15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 ZNF44P15621 663 aa15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 MUC1P15941 1255 aaPredicted RBP15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 CD80P33681 288 aa15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 AP3S2P59780 193 aa15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 TEX36Q5VZQ5 186 aa15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 C7orf50Q9BRJ6 194 aaKnown RBP15.85■□□□□ 0.13
PDLIM3-202ENST00000284770 SEBOXQ9HB31 216 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms