RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 SMPD2O60906 423 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 NMBP08949 121 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 HOXB5P09067 269 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 PET100P0DJ07 73 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 PRKACAP17612 351 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 CA6P23280 308 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 FXYD4P59646 89 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 HERV-K104P61576 105 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 PPP1CBP62140 327 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 IL24Q13007 206 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 GABRA6Q16445 453 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 SRSF7Q16629 238 aaKnown RBP eCLIP11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 BEX5Q5H9J7 111 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 OR2A2Q6IF42 318 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 Q6ZS49 121 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 MOB3AQ96BX8 217 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 OR10C1Q96KK4 312 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 PRRX2Q99811 253 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 MICU1Q9BPX6 476 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 WDR13Q9H1Z4 485 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 SPACA1Q9HBV2 294 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 AHRRA9YTQ3 701 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 RLN2P04090 185 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 HOXC12P31275 282 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 NUP62P37198 522 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 NBL1P41271 181 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 KIR2DL2P43627 348 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 UCP3P55916 312 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 P2RX3P56373 397 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 ZNF169Q14929 603 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 TOR2AQ5JU69 321 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 MYPOPQ86VE0 399 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 SLC38A6Q8IZM9 456 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 C9orf106Q8NAJ2 232 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 POC1AQ8NBT0 407 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 ANGPTL6Q8NI99 470 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 NEK7Q8TDX7 302 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 ARPC5LQ9BPX5 153 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 RTL8AQ9BWD3 113 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 ZNF471Q9BX82 626 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 MPTX1A8MV57 137 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 I3L521 148 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 WISP2O76076 250 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 ZNF205O95201 554 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 NAPSAO96009 420 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 IFNA21P01568 189 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 LUMP51884 338 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 ESPL1Q14674 2120 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 AANATQ16613 207 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 PRSS54Q6PEW0 395 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 Q6ZPA2 131 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 PDZD9Q8IXQ8 264 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 C1orf162Q8NEQ5 155 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 SYT3Q9BQG1 590 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 RNF126Q9BV68 326 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 OR2J1Q9GZK6 312 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 SLC25A32Q9H2D1 315 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 OR51I2Q9H344 312 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 RHOFQ9HBH0 211 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 Q9N2K0 584 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 MED9Q9NWA0 146 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 DLL3Q9NYJ7 618 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 GSKIPQ9P0R6 139 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 IL36RNQ9UBH0 155 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 PFDN2Q9UHV9 154 aa11.06□□□□□ -0.64
SPTLC1-201ENST00000262554 FAM186AA6NE01 2351 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 hCG_1807616A0A1W2PRN6 198 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 F5H0A9 414 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 J3QT63 122 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 TM4SF5O14894 197 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 PDGFAP04085 211 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 LYL1P12980 280 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 RBM39Q14498 530 aaKnown RBP11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 IL13RA2Q14627 380 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 ACSF3Q4G176 576 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 RGS7BPQ6MZT1 257 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 VWA1Q6PCB0 445 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 FAM58AQ8N1B3 248 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 CCDC71LQ8N9Z2 235 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 OR5T2Q8NGG2 359 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 RTN4IP1Q8WWV3 396 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 PHYHIPLQ96FC7 376 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 GALNT14Q96FL9 552 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 CCDC120Q96HB5 630 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 SUCNR1Q9BXA5 334 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 RIMS4Q9H426 269 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 NAA60Q9H7X0 242 aa11.05□□□□□ -0.64
SPTLC1-201ENST00000262554 KIR2DS1A0A191URI9 304 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 A0A1B0GW55 424 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 HSPB6O14558 160 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 PPYP01298 95 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 DUX4L2P0CJ85 424 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 DUX4L3P0CJ86 424 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 DUX4L4P0CJ87 422 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 DUX4L5P0CJ88 424 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 DUX4L6P0CJ89 424 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 DUX4L7P0CJ90 424 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 RAC2P15153 192 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 CBR1P16152 277 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 SELEP16581 610 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms