RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 AQP7O14520 342 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 IL33O95760 270 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 MYF5P13349 255 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 COL10A1Q03692 680 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 SRSF4Q08170 494 aaKnown RBP13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 BTNL3Q6UXE8 466 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 MAML2Q8IZL2 1156 aaPredicted RBP13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 M1APQ8TC57 530 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 TMEM18Q96B42 140 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 MALSU1Q96EH3 234 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 ZNF107Q9UII5 783 aaPredicted RBP13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 PRRC2CQ9Y520 2896 aaKnown RBP13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 LDLRAD4O15165 306 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 FOXS1O43638 330 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 CHST1O43916 411 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 IGHG1P01857 330 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 SERPINE2P07093 398 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 OR4A8P0C604 315 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 FOXF1Q12946 379 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 SPANXN5Q5MJ07 72 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 C9orf135Q5VTT2 229 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 OR1K1Q8NGR3 316 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 OR4F5Q8NH21 305 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 OR4F4Q96R69 305 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 MESP1Q9BRJ9 268 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 PITPNC1Q9UKF7 332 aa13.94□□□□□ -0.18
PRPF40B-201ENST00000261897 SPINK4O60575 86 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 SRP19P09132 144 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 UBE2G2P60604 165 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 TGFBR3Q03167 851 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 CRIPAKQ8N1N5 446 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 CCDC71LQ8N9Z2 235 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 DKKL1Q9UK85 242 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 A0A1B0GUS0 222 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 HSPB2A8KAH6 182 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 TLX3O43711 291 aaPredicted RBP13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 DDAH2O95865 285 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 EGR1P18146 543 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 RAB4BP61018 213 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 HSPB2Q16082 182 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 CCDC74BQ96LY2 380 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 SLC46A1Q96NT5 459 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 OSGIN2Q9Y236 505 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 LRRK1Q38SD2 2015 aa13.93□□□□□ -0.18
PRPF40B-201ENST00000261897 HOXC4P09017 264 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 ZXDAP98168 799 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 TNFRSF9Q07011 255 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 DLX2Q07687 328 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 MYBPHQ13203 477 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 DEFB133Q30KQ1 61 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 COL13A1Q5TAT6 717 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 RNF133Q8WVZ7 376 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 ELSPBP1Q96BH3 223 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 BMFQ96LC9 184 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 ZNF286AQ9HBT8 521 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 PARD6AQ9NPB6 346 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 P4HTMQ9NXG6 502 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 TIMM8BQ9Y5J9 83 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 IGSF23A1L1A6 192 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 ZNF320A2RRD8 509 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 DVL1O14640 695 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 COX5BP10606 129 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 ARL6IP1Q15041 203 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 TMEM196Q5HYL7 178 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 ARHGEF39Q8N4T4 335 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 ZNF845Q96IR2 970 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 SLC25A22Q9H936 323 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 PDGFBP01127 241 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 AMBPP02760 352 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 GALR1P47211 349 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 GLIPR1P48060 266 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 RPP30P78346 268 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 OR5AS1Q8N127 324 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 MVB12AQ96EY5 273 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 METTL9Q9H1A3 318 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 FAM206AQ9NX38 181 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 FRMPD3Q5JV73 1810 aa13.92□□□□□ -0.18
PRPF40B-201ENST00000261897 EML5Q05BV3 1969 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 IGHV3-9P01782 118 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 HBE1P02100 147 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 OR4X1Q8NH49 305 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 DDIT4LQ96D03 193 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 MS4A10Q96PG2 267 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 TCRBV21S2A2A0A5A6 115 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 POU2F2P09086 479 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 AADACP22760 399 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 S100A7P31151 101 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 LIAT1Q6ZQX7 453 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 C16orf82Q7Z2V1 217 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 TMEM252Q8N6L7 170 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 OR1P1Q8NH06 330 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 PTPMT1Q8WUK0 201 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 SERINC1Q9NRX5 453 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 MASP2O00187 686 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 CTSDP07339 412 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 HIKESHIQ53FT3 197 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 ZNF519Q8TB69 540 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 TBX15Q96SF7 602 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 NDUFAF3Q9BU61 184 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 MRPL37Q9BZE1 423 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms