RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 ERRFI1Q9UJM3 462 aaPredicted RBP4.05□□□□□ -1.76
VPS13C-201ENST00000249837 NPTNQ9Y639 398 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 KCNMB2Q9Y691 235 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 A6NCN8 305 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 MSGN1A6NI15 193 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 TSPAN2O60636 221 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 GALNSP34059 522 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 HAAOP46952 286 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 MMP16P51512 607 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 CLN3Q13286 438 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 PABPC1L2AQ5JQF8 200 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 LRRC75AQ8NAA5 344 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 OR4F5Q8NH21 305 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 OR4F4Q96R69 305 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 DHRS7CA6NNS2 312 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF708P17019 499 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 CHRNA7P36544 502 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 SULT1A1P50225 295 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 SPINK9Q5DT21 86 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 ERGIC1Q969X5 290 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 ADIPOR1Q96A54 375 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 NRIP2Q9BQI9 281 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 HEXA-AS1Q9H8Q6 139 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 MIOXQ9UGB7 285 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF107Q9UII5 783 aaPredicted RBP4.05□□□□□ -1.76
VPS13C-201ENST00000249837 A0A1W2PR80 420 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 KITLGP21583 273 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 LHFPL2Q6ZUX7 228 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 POU2F2P09086 479 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 CTRB1P17538 263 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 NXPH1P58417 271 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 PRDX4Q13162 271 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 AWAT1Q58HT5 328 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 CTRB2Q6GPI1 263 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 APH1AQ96BI3 265 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 EDEM2Q9BV94 578 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 G6PC2Q9NQR9 355 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 TMEM131Q92545 1883 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 TMEM41BQ5BJD5 291 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.05□□□□□ -1.76
VPS13C-201ENST00000249837 POC1AQ8NBT0 407 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 APCDD1LQ8NCL9 501 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 WNT16Q9UBV4 365 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 HSF4Q9ULV5 492 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 FAM208BQ5VWN6 2430 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 IGHEP01854 428 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 FSTP19883 344 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 TAS2R30P59541 319 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 HLA-BQ31612 363 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 ETV3LQ6ZN32 361 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 OR2C3Q8N628 320 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 UBAC2Q8NBM4 344 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 TMEM100Q9NV29 134 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 ANXA10Q9UJ72 324 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 WDR87Q6ZQQ6 2873 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 RNF212BA8MTL3 300 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 ICAM2P13598 275 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 CD46P15529 392 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 RAB5AP20339 215 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 P2RY4P51582 365 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 TBC1D26Q86UD7 250 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 ABHD5Q8WTS1 349 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 LURAP1Q96LR2 239 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 WSB1Q9Y6I7 421 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 UBE2L5PA0A1B0GUS4 154 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 CYTIPO60759 359 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 DHRS3O75911 302 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 PDGFBP01127 241 aaPredicted RBP4.05□□□□□ -1.76
VPS13C-201ENST00000249837 FABP4P15090 132 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 FGF7P21781 194 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 G0S2P27469 103 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 SELENOVP59797 346 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 ROM1Q03395 351 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 SLC38A11Q08AI6 406 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 CEBPEQ15744 281 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 H2BFWTQ7Z2G1 175 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 LINC00518Q8N0U6 118 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF501Q96CX3 271 aaPredicted RBP4.05□□□□□ -1.76
VPS13C-201ENST00000249837 VWCEQ96DN2 955 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 RAB33BQ9H082 229 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 CCL28Q9NRJ3 127 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 LHX6Q9UPM6 363 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 LHFPL6Q9Y693 200 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 HCFC1P51610 2035 aa4.05□□□□□ -1.76
VPS13C-201ENST00000249837 MDFIC2A0A1B0GVS7 189 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 KLK2P20151 261 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 GPR12P47775 334 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 CATR1Q13166 79 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 NCMAPQ5T1S8 102 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 WBP1LQ9NX94 342 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 P4HTMQ9NXG6 502 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 EFEMP2O95967 443 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 GLULP15104 373 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 FUT6P51993 359 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 PRAMEF5Q5TYX0 476 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 PRAMEF6Q5VXH4 476 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 D2HGDHQ8N465 521 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 OR13D1Q8NGV5 346 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 OR4A16Q8NH70 328 aa4.04□□□□□ -1.76
VPS13C-201ENST00000249837 FLVCR1-AS1Q8TAF5 88 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms