RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 NTNG2Q96CW9 530 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 FAHD2AQ96GK7 314 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 MBD1Q9UIS9 605 aaPredicted RBP11.7□□□□□ -0.54
COL1A1-201ENST00000225964 TRPM3Q9HCF6 1732 aaPredicted RBP11.7□□□□□ -0.54
COL1A1-201ENST00000225964 CD1BP29016 333 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 DYNLT3P51808 116 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 RAC3P60763 192 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 UBE2L3P68036 154 aaKnown RBP11.7□□□□□ -0.54
COL1A1-201ENST00000225964 C1orf185Q5T7R7 199 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 EIF4E3Q8N5X7 224 aaKnown RBP11.7□□□□□ -0.54
COL1A1-201ENST00000225964 ZNF764Q96H86 408 aaPredicted RBP11.7□□□□□ -0.54
COL1A1-201ENST00000225964 ZNF275Q9NSD4 429 aaPredicted RBP11.7□□□□□ -0.54
COL1A1-201ENST00000225964 PAPPAQ13219 1627 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 TRDCB7Z8K6 153 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 ID1P41134 155 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 INSL4Q14641 139 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 SLC35E4Q6ICL7 350 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 GLDNQ6ZMI3 551 aaPredicted RBP11.7□□□□□ -0.54
COL1A1-201ENST00000225964 CARFQ8N187 725 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 ZNF768Q9H5H4 540 aaKnown RBP11.7□□□□□ -0.54
COL1A1-201ENST00000225964 C9orf170A2RU37 121 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 MAP1LC3B2A6NCE7 125 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 SPNP16150 400 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 CAMPP49913 170 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 GGTLC2Q14390 218 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 GUK1Q16774 197 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 CLEC9AQ6UXN8 241 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 OR6X1Q8NH79 312 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 VSTM2AQ8TAG5 236 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 VSTM2LQ96N03 204 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 C19orf43Q9BQ61 176 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 MAP1LC3BQ9GZQ8 125 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 SLC17A5Q9NRA2 495 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 NQO2P16083 231 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 RANP62826 216 aaKnown RBP11.7□□□□□ -0.54
COL1A1-201ENST00000225964 ZBTB37Q5TC79 503 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 CLEC2AQ6UVW9 174 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 SLC6A13Q9NSD5 602 aa11.7□□□□□ -0.54
COL1A1-201ENST00000225964 ARID1BQ8NFD5 2236 aaPredicted RBP11.69□□□□□ -0.54
COL1A1-201ENST00000225964 SELENOPP49908 381 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 KCNMB1Q16558 191 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 Q8WTZ3 238 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 KCNK15Q9H427 330 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 TINAGQ9UJW2 476 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 VSIG4Q9Y279 399 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 USP54Q70EL1 1684 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 TNRC6CQ9HCJ0 1690 aaKnown RBP11.69□□□□□ -0.54
COL1A1-201ENST00000225964 C16orf97H3BN30 126 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 DUSP18Q8NEJ0 188 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 P2RX4Q99571 388 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 GGNBP1Q5YKI7 109 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 LIAT1Q6ZQX7 453 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 CHODLQ9H9P2 273 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 IL20Q9NYY1 176 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 ZNF638Q14966 1978 aaKnown RBP11.69□□□□□ -0.54
COL1A1-201ENST00000225964 IGHV3-21A0A0B4J1V1 117 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 DRD3P35462 400 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 RPS4XP62701 263 aaKnown RBP11.69□□□□□ -0.54
COL1A1-201ENST00000225964 TMEM241Q24JQ0 296 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 ABHD3Q8WU67 409 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 CA10Q9NS85 328 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 CDIPTO14735 213 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 PMELP40967 661 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 LILRA6Q6PI73 481 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 ANGPTL6Q8NI99 470 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 MOGAT1Q96PD6 335 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 U3KQ87 197 aa11.69□□□□□ -0.54
COL1A1-201ENST00000225964 TMEM127O75204 238 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 ZBTB44Q8NCP5 570 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 ASB5Q8WWX0 329 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 EXOGQ9Y2C4 368 aaKnown RBP11.68□□□□□ -0.54
COL1A1-201ENST00000225964 CBY3A6NI87 242 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 FCN1O00602 326 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 CTAG2O75638 210 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 RHBDL1O75783 438 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 CCL3P10147 92 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 TMPRSS3P57727 454 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 PPP1R1AQ13522 171 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 SLC23A3Q6PIS1 610 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 TMEM37Q8WXS4 190 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 MRPL37Q9BZE1 423 aaKnown RBP11.68□□□□□ -0.54
COL1A1-201ENST00000225964 GPR27Q9NS67 375 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 GSTZ1O43708 216 aaPredicted RBP11.68□□□□□ -0.54
COL1A1-201ENST00000225964 HOXC8P31273 242 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 ZNF66Q6ZN08 573 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 EAF1Q96JC9 268 aaPredicted RBP11.68□□□□□ -0.54
COL1A1-201ENST00000225964 STARD10Q9Y365 291 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 ZNF207O43670 478 aaKnown RBP11.68□□□□□ -0.54
COL1A1-201ENST00000225964 CSN3P07498 182 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 ZNF154Q13106 437 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 GUCA2BQ16661 112 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 TOMM20LQ6UXN7 152 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 CES1P1Q9UKY3 287 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 FAM87AP0C7U9 286 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 CTLA4P16410 223 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 RPS4Y1P22090 263 aaKnown RBP11.68□□□□□ -0.54
COL1A1-201ENST00000225964 UCNP55089 124 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 LOXL3P58215 753 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 CBLN3Q6UW01 205 aa11.68□□□□□ -0.54
COL1A1-201ENST00000225964 Q6ZNX1 250 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms