RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 RTP5Q14D33 572 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 SGCBQ16585 318 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 CXorf66Q5JRM2 361 aaPredicted RBP12.03□□□□□ -0.48
SCARB2-227ENST00000640957 VAX1Q5SQQ9 334 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 OR5C1Q8NGR4 320 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 TMEM171Q8WVE6 324 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 POMT1Q9Y6A1 747 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 E5RGE8 158 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 H3BMH7 237 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 FOLR1P15328 257 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 SPIN3Q5JUX0 258 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 LRRC18Q8N456 261 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 LYPD6BQ8NI32 183 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 NAT6Q93015 286 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 NEU1Q99519 415 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 CABLES2Q9BTV7 478 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 SNHG12Q9BXW3 62 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 PECRQ9BY49 303 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 SRPK3Q9UPE1 567 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 NSG2Q9Y328 171 aa12.02□□□□□ -0.48
SCARB2-227ENST00000640957 A8MWP6 167 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 C3orf80F5H4A9 247 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 AMBPP02760 352 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 NPSP0C0P6 89 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 SEC11BP0C7V7 166 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 CD200P41217 278 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 RAB1AP62820 205 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 RNF4P78317 190 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 MRPS34P82930 218 aaKnown RBP12.02□□□□□ -0.49
SCARB2-227ENST00000640957 KISS1Q15726 138 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 SPSB3Q6PJ21 355 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 BTNL3Q6UXE8 466 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 LHFPL1Q86WI0 220 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 THRSPQ92748 146 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 SHDQ96IW2 340 aa12.02□□□□□ -0.49
SCARB2-227ENST00000640957 FAM230AA0A1W2PPH8 454 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 NKX2-6A6NCS4 301 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 SHISA7A6NL88 538 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 HSPB6O14558 160 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 GPR137BO60478 399 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 EWSR1Q01844 656 aaKnown RBP eCLIP12.01□□□□□ -0.49
SCARB2-227ENST00000640957 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 PLCXD2Q0VAA5 305 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 ZNF154Q13106 437 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 THNSL2Q86YJ6 484 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 PTPMT1Q8WUK0 201 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-227ENST00000640957 TVP23CQ96ET8 276 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 URM1Q9BTM9 101 aaKnown RBP12.01□□□□□ -0.49
SCARB2-227ENST00000640957 GPR87Q9BY21 358 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 ZNF665Q9H7R5 613 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 OBP2AQ9NY56 170 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 ZNF107Q9UII5 783 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-227ENST00000640957 MMACHCQ9Y4U1 282 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 A0A1W2PNR3 127 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 IGSF23A1L1A6 192 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 C9J4A7 227 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 SCGB1D1O95968 90 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 GAPDHP04406 335 aaKnown RBP12.01□□□□□ -0.49
SCARB2-227ENST00000640957 MPZP25189 248 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 CSNK1A1P48729 337 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 NUTF2P61970 127 aaKnown RBP12.01□□□□□ -0.49
SCARB2-227ENST00000640957 COL10A1Q03692 680 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 ICAM4Q14773 271 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 ZNF705AQ6ZN79 300 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-227ENST00000640957 MRPL41Q8IXM3 137 aaKnown RBP12.01□□□□□ -0.49
SCARB2-227ENST00000640957 COMMD1Q8N668 190 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 PLPP5Q8NEB5 264 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 SCGB3A2Q96PL1 93 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 LRFN1Q9P244 771 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 LAMP3Q9UQV4 416 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 FTCDNL1E5RQL4 147 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 MS4A18H0YCH9 400 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 CHRM2P08172 466 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 EDN3P14138 238 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 ZNF17P17021 662 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 RABIFP47224 123 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 PMS2P11Q13670 270 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 ADIRFQ15847 76 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 MS4A18Q3C1V0 323 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 GPR157Q5UAW9 335 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 FNDC7Q5VTL7 733 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 CALHM1Q8IU99 346 aa12.01□□□□□ -0.49
SCARB2-227ENST00000640957 IGHV5-51A0A0C4DH38 117 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 TLCD2A6NGC4 264 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 K7N7A8 449 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 IL18BPO95998 194 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 C1QL4Q86Z23 238 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 CALHM2Q9HA72 323 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 CLEC1BQ9P126 229 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 PPIAL4AQ9Y536 164 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 XKRY2A2RUG3 117 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 FIGNL2A6NMB9 653 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 ST8SIA3O43173 380 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 TNFSF14O43557 240 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 GSTP1P09211 210 aaKnown RBP12□□□□□ -0.49
SCARB2-227ENST00000640957 ZNF728P0DKX0 622 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 PNLIPP16233 465 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 CLN3Q13286 438 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 PPA1Q15181 289 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 ZNF66Q6ZN08 573 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms