RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 RIF1Q5UIP0 2472 aaKnown RBP16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 C13orf42A0A1B0GVH6 325 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 ZNF732B4DXR9 585 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 OR7C1O76099 320 aaPredicted RBP16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 CRHP06850 196 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 BCL3P20749 454 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 PDCD1Q15116 288 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 SLAMF9Q96A28 289 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 HIST1H2AAQ96QV6 131 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 C12orf4Q9NQ89 552 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 RDH8Q9NYR8 311 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 PRSS44E7EML9 344 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 AQP7O14520 342 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 CTSDP07339 412 aaPredicted RBP16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 PSMB6P28072 239 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 FGF12P61328 243 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 DEFB109BQ30KR1 87 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 TMEM211Q6ICI0 200 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 THAP6Q8TBB0 222 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 SCARB1Q8WTV0 552 aa16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 CHMP1AQ9HD42 196 aaPredicted RBP16.93■□□□□ 0.3
PCDHB11-202ENST00000624887 KNG1P01042 644 aa16.92■□□□□ 0.3
PCDHB11-202ENST00000624887 NHLH1Q02575 133 aa16.92■□□□□ 0.3
PCDHB11-202ENST00000624887 TGFBR3Q03167 851 aa16.92■□□□□ 0.3
PCDHB11-202ENST00000624887 GUSBP1Q15486 140 aa16.92■□□□□ 0.3
PCDHB11-202ENST00000624887 ACOT7LQ6ZUV0 252 aa16.92■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM214BQ7L5A3 538 aa16.92■□□□□ 0.3
PCDHB11-202ENST00000624887 MKXQ8IYA7 352 aa16.92■□□□□ 0.3
PCDHB11-202ENST00000624887 OR5P3Q8WZ94 311 aa16.92■□□□□ 0.3
PCDHB11-202ENST00000624887 TRIB1Q96RU8 372 aa16.92■□□□□ 0.3
PCDHB11-202ENST00000624887 LIME1Q9H400 295 aa16.92■□□□□ 0.3
PCDHB11-202ENST00000624887 ZNF286AQ9HBT8 521 aa16.92■□□□□ 0.3
PCDHB11-202ENST00000624887 MPC1Q9Y5U8 109 aa16.92■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM221AA4D161 298 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 RNF222A6NCQ9 220 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 ANKRD30BLA7E2S9 258 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 ZNF891A8MT65 544 aaPredicted RBP16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 ADAP1O75689 374 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 CEACAM4O75871 244 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 WISP2O76076 250 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 IGHV1-2P23083 117 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 PTGER4P35408 488 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 ALKAL2Q6UX46 152 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 BATF2Q8N1L9 274 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 BHLHE23Q8NDY6 225 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 ZNF442Q9H7R0 627 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 PRR13Q9NZ81 148 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 MTCH1Q9NZJ7 389 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 CNOT1A5YKK6 2376 aaKnown RBP16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 J3QW42 95 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 RRASP10301 218 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 ZNF14P17017 642 aaPredicted RBP16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 TBC1D28Q2M2D7 210 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 SLC22A25Q6T423 547 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 COMMD7Q86VX2 200 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 CCDC36Q8IYA8 594 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 GCNT2Q8N0V5 402 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 MARS2Q96GW9 593 aaKnown RBP16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 MBD2Q9UBB5 411 aa16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 URB1O60287 2271 aaKnown RBP16.91■□□□□ 0.3
PCDHB11-202ENST00000624887 F8VVB4 439 aa16.9■□□□□ 0.3
PCDHB11-202ENST00000624887 F8VWA3 439 aa16.9■□□□□ 0.3
PCDHB11-202ENST00000624887 IFNA2P01563 188 aa16.9■□□□□ 0.3
PCDHB11-202ENST00000624887 ATXN7L3Q14CW9 347 aaPredicted RBP16.9■□□□□ 0.3
PCDHB11-202ENST00000624887 PLEKHN1Q494U1 663 aaPredicted RBP16.9■□□□□ 0.3
PCDHB11-202ENST00000624887 Q6ZPA2 131 aa16.9■□□□□ 0.3
PCDHB11-202ENST00000624887 VRK1Q99986 396 aaPredicted RBP16.9■□□□□ 0.3
PCDHB11-202ENST00000624887 PRELID1Q9Y255 219 aa16.9■□□□□ 0.3
PCDHB11-202ENST00000624887 TRBV6-7A0A0A0MS04 114 aa16.89■□□□□ 0.3
PCDHB11-202ENST00000624887 KANTRA0A1W2PQU2 76 aa16.89■□□□□ 0.3
PCDHB11-202ENST00000624887 TRAPPC2LH3BP13 241 aa16.89■□□□□ 0.3
PCDHB11-202ENST00000624887 LILRA1O75019 489 aa16.89■□□□□ 0.3
PCDHB11-202ENST00000624887 UBA52P62987 128 aaKnown RBP16.89■□□□□ 0.3
PCDHB11-202ENST00000624887 AANATQ16613 207 aa16.89■□□□□ 0.3
PCDHB11-202ENST00000624887 Q6ZT83 130 aa16.89■□□□□ 0.3
PCDHB11-202ENST00000624887 SARAFQ96BY9 339 aa16.89■□□□□ 0.3
PCDHB11-202ENST00000624887 OR51B6Q9H340 312 aa16.89■□□□□ 0.3
PCDHB11-202ENST00000624887 KCNMB2Q9Y691 235 aa16.89■□□□□ 0.3
PCDHB11-202ENST00000624887 CRYM-AS1A6NIL9 109 aa16.89■□□□□ 0.29
PCDHB11-202ENST00000624887 OR5B21A6NL26 309 aa16.89■□□□□ 0.29
PCDHB11-202ENST00000624887 BCL2L11O43521 198 aa16.89■□□□□ 0.29
PCDHB11-202ENST00000624887 UBE2NP61088 152 aaKnown RBP16.89■□□□□ 0.29
PCDHB11-202ENST00000624887 MPV17LQ2QL34 196 aa16.89■□□□□ 0.29
PCDHB11-202ENST00000624887 SGPP2Q8IWX5 399 aa16.89■□□□□ 0.29
PCDHB11-202ENST00000624887 INO80EQ8NBZ0 244 aaPredicted RBP16.89■□□□□ 0.29
PCDHB11-202ENST00000624887 EXTL1Q92935 676 aa16.89■□□□□ 0.29
PCDHB11-202ENST00000624887 HS3ST6Q96QI5 342 aa16.89■□□□□ 0.29
PCDHB11-202ENST00000624887 METTL8Q9H825 291 aaKnown RBP16.89■□□□□ 0.29
PCDHB11-202ENST00000624887 PLSCR2Q9NRY7 297 aa16.89■□□□□ 0.29
PCDHB11-202ENST00000624887 RCC2Q9P258 522 aaKnown RBP16.89■□□□□ 0.29
PCDHB11-202ENST00000624887 LOC400499M0QZD8 3231 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 GVINP1Q7Z2Y8 2422 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 MPTX1A8MV57 137 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 I3L521 148 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 SPDEFO95238 335 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 CNOT4O95628 575 aaKnown RBP16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 NMBP08949 121 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 GNG3P63215 75 aa16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 MRPL49Q13405 166 aaKnown RBP16.88■□□□□ 0.29
PCDHB11-202ENST00000624887 OR2T2Q6IF00 324 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms