RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 PPP5CP53041 499 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 SNU13P55769 128 aaKnown RBP15.64■□□□□ 0.09
SSBP4-212ENST00000601919 MRPS10P82664 201 aaKnown RBP15.64■□□□□ 0.09
SSBP4-212ENST00000601919 IKZF1Q13422 519 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 Q6ZTK2 550 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 BIVMQ86UB2 503 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 IZUMO1Q8IYV9 350 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 GDPD1Q8N9F7 314 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 DTX3Q8N9I9 347 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 BOLLQ8N9W6 283 aaKnown RBP15.64■□□□□ 0.09
SSBP4-212ENST00000601919 OR4M2Q8NGB6 313 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 RDH5Q92781 318 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 IFT22Q9H7X7 185 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 PLEKHJ1Q9NW61 149 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 HSF4Q9ULV5 492 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 EDARQ9UNE0 448 aa15.64■□□□□ 0.09
SSBP4-212ENST00000601919 TMEM178BH3BS89 294 aa15.63■□□□□ 0.09
SSBP4-212ENST00000601919 WNT9BO14905 357 aa15.63■□□□□ 0.09
SSBP4-212ENST00000601919 DEGS1O15121 323 aa15.63■□□□□ 0.09
SSBP4-212ENST00000601919 SOCS1O15524 211 aa15.63■□□□□ 0.09
SSBP4-212ENST00000601919 PDCD6O75340 191 aa15.63■□□□□ 0.09
SSBP4-212ENST00000601919 CYB5R3P00387 301 aaPredicted RBP15.63■□□□□ 0.09
SSBP4-212ENST00000601919 MUC1P15941 1255 aaPredicted RBP15.63■□□□□ 0.09
SSBP4-212ENST00000601919 COL8A1P27658 744 aa15.63■□□□□ 0.09
SSBP4-212ENST00000601919 MICBQ29980 383 aa15.63■□□□□ 0.09
SSBP4-212ENST00000601919 MOGAT2Q3SYC2 334 aa15.63■□□□□ 0.09
SSBP4-212ENST00000601919 PEG10Q86TG7 708 aaKnown RBP15.63■□□□□ 0.09
SSBP4-212ENST00000601919 WDR13Q9H1Z4 485 aa15.63■□□□□ 0.09
SSBP4-212ENST00000601919 SEBOXQ9HB31 216 aaPredicted RBP15.63■□□□□ 0.09
SSBP4-212ENST00000601919 TREM2Q9NZC2 230 aa15.63■□□□□ 0.09
SSBP4-212ENST00000601919 NLKQ9UBE8 527 aa15.63■□□□□ 0.09
SSBP4-212ENST00000601919 DOPEY2Q9Y3R5 2298 aa15.63■□□□□ 0.09
SSBP4-212ENST00000601919 TRAV38-1A0A0B4J264 116 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 SERPINE3A8MV23 424 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 OVOL3O00110 214 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 CTDSPLO15194 276 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 F12P00748 615 aaPredicted RBP15.62■□□□□ 0.09
SSBP4-212ENST00000601919 GLAP06280 429 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 HIST1H1DP16402 221 aaKnown RBP15.62■□□□□ 0.09
SSBP4-212ENST00000601919 EGR1P18146 543 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 CDKN1AP38936 164 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 PTH2RP49190 550 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 EFNA4P52798 201 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 SCN1BQ07699 218 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 MADCAM1Q13477 382 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 KCNJ8Q15842 424 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 PNLIPRP3Q17RR3 467 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 CDNFQ49AH0 187 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 NKAPLQ5M9Q1 402 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 ATAD3CQ5T2N8 411 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 SNX29P2Q8IUI4 249 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 MARVELD3Q96A59 401 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 ARHGAP5-AS1Q96IT6 56 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 CCDC32Q9BV29 185 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 SRRQ9GZT4 340 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 AUNIPQ9H7T9 357 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.62■□□□□ 0.09
SSBP4-212ENST00000601919 WIPI2Q9Y4P8 454 aa15.62■□□□□ 0.09
SSBP4-212ENST00000601919 USP9YO00507 2555 aaPredicted RBP15.61■□□□□ 0.09
SSBP4-212ENST00000601919 HELZ2Q9BYK8 2649 aaKnown RBP15.61■□□□□ 0.09
SSBP4-212ENST00000601919 PPIAL4EA0A075B759 164 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 OOEPA6NGQ2 149 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 FOXI3A8MTJ6 420 aaPredicted RBP15.61■□□□□ 0.09
SSBP4-212ENST00000601919 PPIAL4DF5H284 164 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 LGALS8O00214 317 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 SULT1C2O00338 296 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 HAND1O96004 215 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 HLA-DQB1P01920 261 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 PPIAL4FP0DN26 164 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 DAOP14920 347 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 ZNF44P15621 663 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 GNB3P16520 340 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 CHATP28329 748 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 DUSP1P28562 367 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 PRSS3P35030 304 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 RBM39Q14498 530 aaKnown RBP15.61■□□□□ 0.09
SSBP4-212ENST00000601919 ZNF79Q15937 498 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 ZNF260Q3ZCT1 412 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 TEX36Q5VZQ5 186 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 Q8N402 240 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 BORCS5Q969J3 196 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 ABHD1Q96SE0 405 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 PECRQ9BY49 303 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 SCPEP1Q9HB40 452 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 IL36RNQ9UBH0 155 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 OR14J1Q9UGF5 321 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 PPIAL4AQ9Y536 164 aa15.61■□□□□ 0.09
SSBP4-212ENST00000601919 HRNRQ86YZ3 2850 aaPredicted RBP15.61■□□□□ 0.09
SSBP4-212ENST00000601919 COL12A1Q99715 3063 aa15.6■□□□□ 0.09
SSBP4-212ENST00000601919 RFPL4AA6NLU0 287 aa15.6■□□□□ 0.09
SSBP4-212ENST00000601919 OR2AT4A6NND4 320 aa15.6■□□□□ 0.09
SSBP4-212ENST00000601919 MCRIP1C9JLW8 97 aa15.6■□□□□ 0.09
SSBP4-212ENST00000601919 RFPL4AL1F8VTS6 287 aa15.6■□□□□ 0.09
SSBP4-212ENST00000601919 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.6■□□□□ 0.09
SSBP4-212ENST00000601919 MFNGO00587 321 aa15.6■□□□□ 0.09
SSBP4-212ENST00000601919 CA11O75493 328 aa15.6■□□□□ 0.09
SSBP4-212ENST00000601919 FSTL3O95633 263 aa15.6■□□□□ 0.09
SSBP4-212ENST00000601919 MELTFP08582 738 aa15.6■□□□□ 0.09
SSBP4-212ENST00000601919 CD80P33681 288 aa15.6■□□□□ 0.09
SSBP4-212ENST00000601919 TMEM50BP56557 158 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms